RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 IRS2Q9Y4H2 1338 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 GSPT1P15170 499 aaKnown RBP13.09□□□□□ -0.31
CLN5-213ENST00000636681 MX1P20591 662 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 BCAMP50895 628 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 PUM3Q15397 648 aaKnown RBP13.09□□□□□ -0.31
CLN5-213ENST00000636681 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
CLN5-213ENST00000636681 PIM2Q9P1W9 311 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 UFL1O94874 794 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 TBC1D16Q8TBP0 767 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 SYT17Q9BSW7 474 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 GPR108Q9NPR9 543 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 SNRKQ9NRH2 765 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 BCS1LQ9Y276 419 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 ZNF804BA4D1E1 1349 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 XDHP47989 1333 aa13.08□□□□□ -0.32
CLN5-213ENST00000636681 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 LPIN2Q92539 896 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 COL4A5P29400 1685 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 KCNJ4P48050 445 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 MPNDQ8N594 471 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 FAM84BQ96KN1 310 aaPredicted RBP13.07□□□□□ -0.32
CLN5-213ENST00000636681 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 BOLA2Q9H3K6 86 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
CLN5-213ENST00000636681 SLC5A1P13866 664 aa13.06□□□□□ -0.32
CLN5-213ENST00000636681 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
CLN5-213ENST00000636681 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
CLN5-213ENST00000636681 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
CLN5-213ENST00000636681 DPP8Q6V1X1 898 aaPredicted RBP13.06□□□□□ -0.32
CLN5-213ENST00000636681 ECHDC1Q9NTX5 307 aa13.06□□□□□ -0.32
CLN5-213ENST00000636681 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
CLN5-213ENST00000636681 GGA1Q9UJY5 639 aa13.06□□□□□ -0.32
CLN5-213ENST00000636681 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
CLN5-213ENST00000636681 CHGBP05060 677 aa13.05□□□□□ -0.32
CLN5-213ENST00000636681 GORABQ5T7V8 394 aa13.05□□□□□ -0.32
CLN5-213ENST00000636681 TTC22Q5TAA0 569 aa13.05□□□□□ -0.32
CLN5-213ENST00000636681 IFIT1P09914 478 aaKnown RBP13.04□□□□□ -0.32
CLN5-213ENST00000636681 MCAMP43121 646 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
CLN5-213ENST00000636681 MYH7P12883 1935 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 ATP2B4P23634 1241 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 PRELPP51888 382 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 RASSF7Q02833 373 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 TTC39AQ5SRH9 613 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 TMC4Q7Z404 712 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
CLN5-213ENST00000636681 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 ANTXR1Q9H6X2 564 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 KCNQ5Q9NR82 932 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 SBF1O95248 1867 aa13.04□□□□□ -0.32
CLN5-213ENST00000636681 YBX3P16989 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLN5-213ENST00000636681 RASGRF1Q13972 1273 aa13.03□□□□□ -0.32
CLN5-213ENST00000636681 FBXO33Q7Z6M2 555 aa13.03□□□□□ -0.32
CLN5-213ENST00000636681 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
CLN5-213ENST00000636681 NFKBIEO00221 500 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 ATP5JP18859 108 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 SDSP20132 328 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 ZAP70P43403 619 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 AOC3Q16853 763 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 CCDC93Q567U6 631 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 ZNF277Q9NRM2 450 aaPredicted RBP13.02□□□□□ -0.32
CLN5-213ENST00000636681 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.32
CLN5-213ENST00000636681 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
CLN5-213ENST00000636681 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
CLN5-213ENST00000636681 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.33
CLN5-213ENST00000636681 CCDC158Q5M9N0 1113 aa13.02□□□□□ -0.33
CLN5-213ENST00000636681 RILPL2Q969X0 211 aa13.02□□□□□ -0.33
CLN5-213ENST00000636681 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
CLN5-213ENST00000636681 ARID4AP29374 1257 aaPredicted RBP13.01□□□□□ -0.33
CLN5-213ENST00000636681 FKBP4Q02790 459 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLN5-213ENST00000636681 WASHC4Q2M389 1173 aa13.01□□□□□ -0.33
CLN5-213ENST00000636681 MED23Q9ULK4 1368 aa13.01□□□□□ -0.33
CLN5-213ENST00000636681 GOLIM4O00461 696 aa13□□□□□ -0.33
CLN5-213ENST00000636681 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
CLN5-213ENST00000636681 CYP2E1P05181 493 aaPredicted RBP13□□□□□ -0.33
CLN5-213ENST00000636681 CHAF1AQ13111 956 aaPredicted RBP13□□□□□ -0.33
CLN5-213ENST00000636681 GRIK5Q16478 980 aa13□□□□□ -0.33
CLN5-213ENST00000636681 HAUS7Q99871 368 aa13□□□□□ -0.33
CLN5-213ENST00000636681 MXD3Q9BW11 206 aa13□□□□□ -0.33
CLN5-213ENST00000636681 RTFDC1Q9BY42 306 aaPredicted RBP13□□□□□ -0.33
CLN5-213ENST00000636681 CD209Q9NNX6 404 aa13□□□□□ -0.33
CLN5-213ENST00000636681 PIH1D3Q9NQM4 214 aaKnown RBP13□□□□□ -0.33
CLN5-213ENST00000636681 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
CLN5-213ENST00000636681 AOX1Q06278 1338 aa12.99□□□□□ -0.33
CLN5-213ENST00000636681 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
CLN5-213ENST00000636681 VPS37DQ86XT2 251 aa12.99□□□□□ -0.33
CLN5-213ENST00000636681 GPATCH3Q96I76 525 aa12.99□□□□□ -0.33
CLN5-213ENST00000636681 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
CLN5-213ENST00000636681 PSME4Q14997 1843 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms