RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 KRT19P08727 400 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 E7EVH7 732 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 DIXDC1Q155Q3 683 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 CCDC155Q8N6L0 562 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 NEK1Q96PY6 1258 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 NOP56O00567 594 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 DZIP3Q86Y13 1208 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 IFT81Q8WYA0 676 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 CCDC61Q9Y6R9 512 aa20.24■□□□□ 0.83
CACNA1A-227ENST00000636549 GIMAP6Q6P9H5 292 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 KIF18AQ8NI77 898 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 RTN1Q16799 776 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 SEPT14Q6ZU15 432 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 CPXCR1Q8N123 301 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 IGF1RP08069 1367 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 ZCRB1Q8TBF4 217 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 AFG3L2Q9Y4W6 797 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 PPP1R9BQ96SB3 815 aa20.23■□□□□ 0.83
CACNA1A-227ENST00000636549 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 PAGR1Q9BTK6 254 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 C20orf194Q5TEA3 1177 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 SLC52A1Q9NWF4 448 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 TLDC2A0PJX2 215 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 GNG11P61952 73 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 PPP1R7Q15435 360 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 RPUSD2Q8IZ73 545 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 ANAPC4Q9UJX5 808 aa20.22■□□□□ 0.83
CACNA1A-227ENST00000636549 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 IRAK4Q9NWZ3 460 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 TBC1D7Q9P0N9 293 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 SLC9C2Q5TAH2 1124 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 JAKMIP2Q96AA8 810 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 FANCIQ9NVI1 1328 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 TOM1O60784 492 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 USTQ9Y2C2 406 aa20.21■□□□□ 0.83
CACNA1A-227ENST00000636549 SSH1Q8WYL5 1049 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 SESTD1Q86VW0 696 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 HMGB1P09429 215 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 ZBTB43O43298 467 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 GAS8O95995 478 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 PDE3AQ14432 1141 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 KARSQ15046 597 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 EVI5LQ96CN4 794 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 V9GYY5 206 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 KIF21BO75037 1637 aa20.2■□□□□ 0.82
CACNA1A-227ENST00000636549 Q6ZUG5 572 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 SYKP43405 635 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 ABCF3Q9NUQ8 709 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 SNW1Q13573 536 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 DAAM2Q86T65 1068 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 IVNS1ABPQ9Y6Y0 642 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 DTNBO60941 627 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 AAMPQ13685 434 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 SPECC1LQ69YQ0 1117 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 LRRC43Q8N309 656 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 CGNQ9P2M7 1197 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 BSPRYQ5W0U4 402 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 COPS6Q7L5N1 327 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 PLEKHA4Q9H4M7 779 aa20.19■□□□□ 0.82
CACNA1A-227ENST00000636549 UBASH3AP57075 661 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 CKAP4Q07065 602 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 BRF1Q92994 677 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 STX1AQ16623 288 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 MTERF4Q7Z6M4 381 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 NESP48681 1621 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 LRRC9Q6ZRR7 1453 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 ADCY5O95622 1261 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 RPAP2Q8IXW5 612 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 METTL13Q8N6R0 699 aa20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 SEC62Q99442 399 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 BZW2Q9Y6E2 419 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-227ENST00000636549 RIOK3O14730 519 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 UFL1O94874 794 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 PPFIA1Q13136 1202 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 BCS1LQ9Y276 419 aa20.17■□□□□ 0.82
CACNA1A-227ENST00000636549 ZBTB24O43167 697 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 HSPA1LP34931 641 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 MED10Q9BTT4 135 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 TTC12Q9H892 705 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 GOLGA6CA6NDK9 693 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 GOLGA6BA6NDN3 693 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 GOLGA6DP0CG33 693 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 Q3C1V9 767 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 ARHGAP27Q6ZUM4 889 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 GOLGA6AQ9NYA3 693 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 MCM5P33992 734 aa20.16■□□□□ 0.82
CACNA1A-227ENST00000636549 CNPY2Q9Y2B0 182 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms