RNA–Protein interactions for RNA: ENST00000636520.1

CLN5-210, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 5,889 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-210ENST00000636520 SMARCC2Q8TAQ2 1214 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
CLN5-210ENST00000636520 USP19O94966 1318 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 ARHGEF40Q8TER5 1519 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 DNM2P50570 870 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
CLN5-210ENST00000636520 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 DBNDD1Q9H9R9 158 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 ZHX1Q9UKY1 873 aaPredicted RBP8.12□□□□□ -1.11
CLN5-210ENST00000636520 CDKL5O76039 1030 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 TRMT44Q8IYL2 757 aaKnown RBP8.12□□□□□ -1.11
CLN5-210ENST00000636520 PUF60Q9UHX1 559 aaKnown RBP8.12□□□□□ -1.11
CLN5-210ENST00000636520 METP08581 1390 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
CLN5-210ENST00000636520 KCNQ4P56696 695 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 ANO2Q9NQ90 1003 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 IQSEC3Q9UPP2 1182 aaPredicted RBP8.12□□□□□ -1.11
CLN5-210ENST00000636520 B4GALNT3Q6L9W6 998 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 MICALL2Q8IY33 904 aa8.12□□□□□ -1.11
CLN5-210ENST00000636520 ERVV-1B6SEH8 477 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 HOXB7P09629 217 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 GRAPQ13588 217 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 GRAPLQ8TC17 118 aaPredicted RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 ORC3Q9UBD5 711 aaPredicted RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 PPP2R1AP30153 589 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 EPS15P42566 896 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 TPRNQ4KMQ1 711 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 LMBR1LQ6UX01 489 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 NSMFQ6X4W1 530 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 MAP3K4Q9Y6R4 1608 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 PES1O00541 588 aaKnown RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 CHRNA5P30532 468 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 HS1BP3Q53T59 392 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 RTL1A6NKG5 1358 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 FANCIQ9NVI1 1328 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 PRMT2P55345 433 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 KIAA1841Q6NSI8 718 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 CREBRFQ8IUR6 639 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 WASF1Q92558 559 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 SECISBP2LQ93073 1101 aaKnown RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 CAPNS2Q96L46 248 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 ZFYP08048 801 aaPredicted RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 IGFBP4P22692 258 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 TRIM44Q96DX7 344 aaPredicted RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 C22orf23Q9BZE7 217 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 RBM28Q9NW13 759 aaKnown RBP8.11□□□□□ -1.11
CLN5-210ENST00000636520 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
CLN5-210ENST00000636520 CCL15-CCL14A0A0B4J2E2 113 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 FKBP1BP68106 108 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 TCP10Q12799 353 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 CCL15Q16663 113 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
CLN5-210ENST00000636520 MCTP1Q6DN14 999 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 SRP68Q9UHB9 627 aaKnown RBP8.1□□□□□ -1.11
CLN5-210ENST00000636520 ABCC3O15438 1527 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 GNAT1P11488 350 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 FAM89AQ96GI7 184 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 MCM9Q9NXL9 1143 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 GNAT2P19087 354 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 SYCP1Q15431 976 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
CLN5-210ENST00000636520 CATIPQ7Z7H3 387 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 TCHPQ9BT92 498 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 KIF7Q2M1P5 1343 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 CLRN2A0PK11 232 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 TMPOP42166 694 aaKnown RBP8.1□□□□□ -1.11
CLN5-210ENST00000636520 TRIM6Q9C030 488 aaPredicted RBP8.1□□□□□ -1.11
CLN5-210ENST00000636520 ZBTB1Q9Y2K1 713 aa8.1□□□□□ -1.11
CLN5-210ENST00000636520 SPDYE3A6NKU9 549 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 RGMBQ6NW40 437 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 PIGBQ92521 554 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 ZHX3Q9H4I2 956 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 C6orf50Q9HD87 102 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 KIF24Q5T7B8 1368 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 UQCRHP07919 91 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 AAMPQ13685 434 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 C1orf228Q6PIY5 440 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 KIF1BPQ96EK5 621 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 GLTPD2A6NH11 291 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 FLIIQ13045 1269 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 SMC1AQ14683 1233 aaKnown RBP8.09□□□□□ -1.11
CLN5-210ENST00000636520 WDR63Q8IWG1 891 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 CPXCR1Q8N123 301 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 TTC16Q8NEE8 873 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 OTUD5Q96G74 571 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 NUDT12Q9BQG2 462 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 CIZ1Q9ULV3 898 aaPredicted RBP8.09□□□□□ -1.11
CLN5-210ENST00000636520 ROBO2Q9HCK4 1378 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
CLN5-210ENST00000636520 STXBP4Q6ZWJ1 553 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 RNF180Q86T96 592 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 ZNF496Q96IT1 587 aaPredicted RBP8.09□□□□□ -1.11
CLN5-210ENST00000636520 MAP3K15Q6ZN16 1313 aa8.09□□□□□ -1.11
CLN5-210ENST00000636520 ST18O60284 1047 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms