RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 PNMA2Q9UL42 364 aa7.19□□□□□ -1.26
GABRB3-218ENST00000635994 FAM169AQ9Y6X4 670 aa7.19□□□□□ -1.26
GABRB3-218ENST00000635994 TMEM2Q9UHN6 1383 aa7.19□□□□□ -1.26
GABRB3-218ENST00000635994 BCAR3O75815 825 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 DDB1Q16531 1140 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 SMC6Q96SB8 1091 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 IL1RAPL2Q9NP60 686 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 CGNQ9P2M7 1197 aaKnown RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 RPRD2Q5VT52 1461 aaKnown RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 NSD2O96028 1365 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 FAM13AO94988 1023 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 CYLC1P35663 651 aaPredicted RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 RBM25P49756 843 aaKnown RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 CCT6BQ92526 530 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 NOX5Q96PH1 765 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 CSRNP2Q9H175 543 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 RTL9Q8NET4 1388 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 HMGB3O15347 200 aaKnown RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 CCDC102BQ68D86 513 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 ZNF772Q68DY9 489 aaPredicted RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 NSMCE1Q8WV22 266 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 TIGD1Q96MW7 591 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 C1orf115Q9H7X2 142 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 ECHDC1Q9NTX5 307 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 TFCP2L1Q9NZI6 479 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 ADGBQ8N7X0 1667 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 A0A1W2PRG0 241 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 TUBB4BP68371 445 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 WTAPQ15007 396 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 PTPN14Q15678 1187 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 AFAP1L2Q8N4X5 818 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 RBM17Q96I25 401 aaKnown RBP7.18□□□□□ -1.26
GABRB3-218ENST00000635994 STX8Q9UNK0 236 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 PIK3R4Q99570 1358 aa7.18□□□□□ -1.26
GABRB3-218ENST00000635994 ATP5J2-PTCD1G3V325 749 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 AKR1B10O60218 316 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 GNA11P29992 359 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 METAP2P50579 478 aaKnown RBP eCLIP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 PRPF4BQ13523 1007 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 PLS1Q14651 629 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 ELMSAN1Q6PJG2 1045 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 CCDC89Q8N998 374 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 RAB3IPQ96QF0 476 aaPredicted RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 VEZTQ9HBM0 779 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 NR1I2O75469 434 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 MCM5P33992 734 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 KIF5AQ12840 1032 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 RRS1Q15050 365 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 CCDC125Q86Z20 511 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 SMC1BQ8NDV3 1235 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 GSDMBQ8TAX9 411 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 BOLA2Q9H3K6 86 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 SCAF11Q99590 1463 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 RPL13P26373 211 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 CFAP58Q5T655 872 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 KRT79Q5XKE5 535 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 NAA16Q6N069 864 aaPredicted RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 PRPF40BQ6NWY9 871 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 ZCRB1Q8TBF4 217 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 PPP1R9BQ96SB3 815 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 C14orf93Q9H972 538 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 VAT1LQ9HCJ6 419 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 EFCAB6Q5THR3 1501 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 PSMA7O14818 248 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 NOL3O60936 208 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 CCDC183Q5T5S1 534 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 TSR2Q969E8 191 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 RRP36Q96EU6 259 aaKnown RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 TRIM47Q96LD4 638 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 HAUS7Q99871 368 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 ZSCAN16Q9H4T2 348 aaPredicted RBP7.17□□□□□ -1.26
GABRB3-218ENST00000635994 LIMCH1Q9UPQ0 1083 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 USP16Q9Y5T5 823 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 ADGRF5Q8IZF2 1346 aa7.17□□□□□ -1.26
GABRB3-218ENST00000635994 ERCC6LQ2NKX8 1250 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 OTUD7BQ6GQQ9 843 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 DAAM2Q86T65 1068 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 TUBB4AP04350 444 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 GPTP24298 496 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 ATP6V1AP38606 617 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 TMPOP42166 694 aaKnown RBP7.16□□□□□ -1.26
GABRB3-218ENST00000635994 PABPC4Q13310 644 aaKnown RBP eCLIP7.16□□□□□ -1.26
GABRB3-218ENST00000635994 NPATQ14207 1427 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 SLAIN2Q9P270 581 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 BICDL2A1A5D9 508 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 BACH1O14867 736 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 GIPC1O14908 333 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 BAG6P46379 1132 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 KIF11P52732 1056 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 IFIT1BQ5T764 474 aaKnown RBP7.16□□□□□ -1.26
GABRB3-218ENST00000635994 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 EXOC7Q9UPT5 735 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 STX10O60499 249 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 STX1AQ16623 288 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 SRGAP1Q7Z6B7 1085 aa7.16□□□□□ -1.26
GABRB3-218ENST00000635994 OPA1O60313 960 aa7.15□□□□□ -1.26
GABRB3-218ENST00000635994 CYP7A1P22680 504 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms