RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 RC3H1Q5TC82 1133 aaKnown RBP21.45■■□□□ 1.02
CLN5-206ENST00000635915 CCDC83Q8IWF9 413 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 CCDC24Q8N4L8 307 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 TAF1P21675 1872 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 RPS6KB1P23443 525 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 TSGA10IPQ3SY00 556 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 NECAB1Q8N987 351 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 LPIN2Q92539 896 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 TPCN1Q9ULQ1 816 aa21.45■■□□□ 1.02
CLN5-206ENST00000635915 ONECUT3O60422 494 aaPredicted RBP21.44■■□□□ 1.02
CLN5-206ENST00000635915 ME3Q16798 604 aa21.44■■□□□ 1.02
CLN5-206ENST00000635915 IL27Q8NEV9 243 aa21.44■■□□□ 1.02
CLN5-206ENST00000635915 NARFQ9UHQ1 456 aa21.44■■□□□ 1.02
CLN5-206ENST00000635915 SBF2Q86WG5 1849 aa21.44■■□□□ 1.02
CLN5-206ENST00000635915 IGHMBP2P38935 993 aaKnown RBP21.44■■□□□ 1.02
CLN5-206ENST00000635915 QTRT2Q9H974 415 aaKnown RBP21.44■■□□□ 1.02
CLN5-206ENST00000635915 MYO5AQ9Y4I1 1855 aaKnown RBP21.43■■□□□ 1.02
CLN5-206ENST00000635915 ABCC12Q96J65 1359 aa21.43■■□□□ 1.02
CLN5-206ENST00000635915 PHF14O94880 888 aa21.43■■□□□ 1.02
CLN5-206ENST00000635915 GTF2E1P29083 439 aaPredicted RBP21.43■■□□□ 1.02
CLN5-206ENST00000635915 ST3GAL1Q11201 340 aa21.43■■□□□ 1.02
CLN5-206ENST00000635915 STOX1Q6ZVD7 989 aa21.43■■□□□ 1.02
CLN5-206ENST00000635915 PUS7LQ9H0K6 701 aaKnown RBP21.43■■□□□ 1.02
CLN5-206ENST00000635915 PIH1D3Q9NQM4 214 aaKnown RBP21.43■■□□□ 1.02
CLN5-206ENST00000635915 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
CLN5-206ENST00000635915 LAMB2P55268 1798 aa21.43■■□□□ 1.02
CLN5-206ENST00000635915 BRD1O95696 1058 aa21.43■■□□□ 1.02
CLN5-206ENST00000635915 ARHGEF1Q92888 912 aaKnown RBP21.43■■□□□ 1.02
CLN5-206ENST00000635915 ZPR1O75312 459 aa21.42■■□□□ 1.02
CLN5-206ENST00000635915 TTLL5Q6EMB2 1281 aa21.42■■□□□ 1.02
CLN5-206ENST00000635915 DSCC1Q9BVC3 393 aa21.42■■□□□ 1.02
CLN5-206ENST00000635915 SCN7AQ01118 1682 aa21.42■■□□□ 1.02
CLN5-206ENST00000635915 WTIPA6NIX2 430 aaPredicted RBP21.42■■□□□ 1.02
CLN5-206ENST00000635915 HSP90B1P14625 803 aaKnown RBP21.42■■□□□ 1.02
CLN5-206ENST00000635915 TOB2Q14106 344 aaPredicted RBP21.42■■□□□ 1.02
CLN5-206ENST00000635915 NEK1Q96PY6 1258 aa21.42■■□□□ 1.02
CLN5-206ENST00000635915 RTL9Q8NET4 1388 aa21.41■■□□□ 1.02
CLN5-206ENST00000635915 FOXP2O15409 715 aa21.41■■□□□ 1.02
CLN5-206ENST00000635915 SLC5A1P13866 664 aa21.41■■□□□ 1.02
CLN5-206ENST00000635915 CHRNDQ07001 517 aa21.41■■□□□ 1.02
CLN5-206ENST00000635915 FOXD4L6Q3SYB3 417 aaPredicted RBP21.41■■□□□ 1.02
CLN5-206ENST00000635915 FOXD4L3Q6VB84 417 aaPredicted RBP21.41■■□□□ 1.02
CLN5-206ENST00000635915 LRRC4BQ9NT99 713 aa21.41■■□□□ 1.02
CLN5-206ENST00000635915 GOLGA6L22H0YM25 854 aa21.4■■□□□ 1.02
CLN5-206ENST00000635915 IDH1O75874 414 aaKnown RBP21.4■■□□□ 1.02
CLN5-206ENST00000635915 ARID4AP29374 1257 aaPredicted RBP21.4■■□□□ 1.02
CLN5-206ENST00000635915 ZNF512BQ96KM6 892 aaPredicted RBP21.4■■□□□ 1.02
CLN5-206ENST00000635915 LRRC2Q9BYS8 371 aa21.4■■□□□ 1.02
CLN5-206ENST00000635915 KRT32Q14532 448 aa21.4■■□□□ 1.02
CLN5-206ENST00000635915 TICAM2Q86XR7 235 aa21.4■■□□□ 1.02
CLN5-206ENST00000635915 SETDB2Q96T68 719 aa21.4■■□□□ 1.02
CLN5-206ENST00000635915 TAF1LQ8IZX4 1826 aa21.4■■□□□ 1.02
CLN5-206ENST00000635915 ZFYP08048 801 aaPredicted RBP21.39■■□□□ 1.02
CLN5-206ENST00000635915 BCAMP50895 628 aa21.39■■□□□ 1.02
CLN5-206ENST00000635915 SLC9C2Q5TAH2 1124 aa21.39■■□□□ 1.02
CLN5-206ENST00000635915 SMC3Q9UQE7 1217 aa21.39■■□□□ 1.02
CLN5-206ENST00000635915 MYH7P12883 1935 aa21.39■■□□□ 1.01
CLN5-206ENST00000635915 RASGRF1Q13972 1273 aa21.39■■□□□ 1.01
CLN5-206ENST00000635915 LRRFIP1Q32MZ4 808 aaKnown RBP21.39■■□□□ 1.01
CLN5-206ENST00000635915 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.01
CLN5-206ENST00000635915 APPBP2Q92624 585 aa21.39■■□□□ 1.01
CLN5-206ENST00000635915 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.01
CLN5-206ENST00000635915 SH2B1Q9NRF2 756 aaPredicted RBP21.39■■□□□ 1.01
CLN5-206ENST00000635915 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.39■■□□□ 1.01
CLN5-206ENST00000635915 LY75O60449 1722 aa21.39■■□□□ 1.01
CLN5-206ENST00000635915 FAM196AQ6ZSG2 479 aa21.38■■□□□ 1.01
CLN5-206ENST00000635915 CDC5LQ99459 802 aaKnown RBP21.38■■□□□ 1.01
CLN5-206ENST00000635915 STK3Q13188 491 aa21.38■■□□□ 1.01
CLN5-206ENST00000635915 UQCRFS1P1P0C7P4 283 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
CLN5-206ENST00000635915 WWC3Q9ULE0 1092 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 CASZ1Q86V15 1759 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 GJB2P29033 226 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 ADD2P35612 726 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 SPATA5Q8NB90 893 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 CELF1Q92879 486 aaKnown RBP21.37■■□□□ 1.01
CLN5-206ENST00000635915 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.37■■□□□ 1.01
CLN5-206ENST00000635915 ARAP2Q8WZ64 1704 aa21.37■■□□□ 1.01
CLN5-206ENST00000635915 GPAA1O43292 621 aa21.36■■□□□ 1.01
CLN5-206ENST00000635915 HAND2P61296 217 aa21.36■■□□□ 1.01
CLN5-206ENST00000635915 Q6ZUG5 572 aa21.36■■□□□ 1.01
CLN5-206ENST00000635915 BCL11BQ9C0K0 894 aaPredicted RBP21.36■■□□□ 1.01
CLN5-206ENST00000635915 LMBRD1Q9NUN5 540 aa21.36■■□□□ 1.01
CLN5-206ENST00000635915 IQSEC3Q9UPP2 1182 aaPredicted RBP21.36■■□□□ 1.01
CLN5-206ENST00000635915 PRPF40AO75400 957 aaKnown RBP21.36■■□□□ 1.01
CLN5-206ENST00000635915 SYT1P21579 422 aa21.36■■□□□ 1.01
CLN5-206ENST00000635915 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
CLN5-206ENST00000635915 RFC4P35249 363 aa21.35■■□□□ 1.01
CLN5-206ENST00000635915 TTF1Q15361 905 aaPredicted RBP21.35■■□□□ 1.01
CLN5-206ENST00000635915 LAMA4Q16363 1823 aa21.35■■□□□ 1.01
CLN5-206ENST00000635915 ZNF532Q9HCE3 1301 aa21.35■■□□□ 1.01
CLN5-206ENST00000635915 E7EWF7 191 aa21.35■■□□□ 1.01
CLN5-206ENST00000635915 ANKRD1Q15327 319 aa21.35■■□□□ 1.01
CLN5-206ENST00000635915 DDX49Q9Y6V7 483 aaKnown RBP21.35■■□□□ 1.01
CLN5-206ENST00000635915 FGAP02671 866 aa21.34■■□□□ 1.01
CLN5-206ENST00000635915 PDE6AP16499 860 aa21.34■■□□□ 1.01
CLN5-206ENST00000635915 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
CLN5-206ENST00000635915 ALDH8A1Q9H2A2 487 aaPredicted RBP21.34■■□□□ 1.01
CLN5-206ENST00000635915 TRAPPC3LQ5T215 181 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms