RNA–Protein interactions for RNA: ENST00000635905.1

CLN5-205, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-205ENST00000635905 NAP1L2Q9ULW6 460 aaPredicted RBP22.35■■□□□ 1.17
CLN5-205ENST00000635905 ILDR1Q86SU0 546 aaPredicted RBP22.35■■□□□ 1.17
CLN5-205ENST00000635905 IMPACTQ9P2X3 320 aa22.34■■□□□ 1.17
CLN5-205ENST00000635905 VGLL3A8MV65 326 aa22.34■■□□□ 1.17
CLN5-205ENST00000635905 ZC3H6P61129 1189 aaKnown RBP22.34■■□□□ 1.17
CLN5-205ENST00000635905 FMR1NBQ8N0W7 255 aaPredicted RBP22.34■■□□□ 1.17
CLN5-205ENST00000635905 ZNF396Q96N95 335 aaPredicted RBP22.34■■□□□ 1.17
CLN5-205ENST00000635905 DNAJC2Q99543 621 aaKnown RBP22.34■■□□□ 1.17
CLN5-205ENST00000635905 PCDHA7Q9UN72 937 aa22.34■■□□□ 1.17
CLN5-205ENST00000635905 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLN5-205ENST00000635905 U3KPZ7 1027 aaPredicted RBP22.34■■□□□ 1.17
CLN5-205ENST00000635905 ZNF609O15014 1411 aa22.33■■□□□ 1.17
CLN5-205ENST00000635905 PNMA6AP0CW24 399 aaPredicted RBP22.33■■□□□ 1.17
CLN5-205ENST00000635905 SFPQP23246 707 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLN5-205ENST00000635905 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.17
CLN5-205ENST00000635905 LLPHQ9BRT6 129 aaKnown RBP22.33■■□□□ 1.17
CLN5-205ENST00000635905 DBNLQ9UJU6 430 aaKnown RBP22.33■■□□□ 1.17
CLN5-205ENST00000635905 BIN1O00499 593 aa22.33■■□□□ 1.17
CLN5-205ENST00000635905 MRPS27Q92552 414 aaKnown RBP22.33■■□□□ 1.16
CLN5-205ENST00000635905 AXIN2Q9Y2T1 843 aa22.33■■□□□ 1.16
CLN5-205ENST00000635905 PLA2G4AP47712 749 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 NDUFA8P51970 172 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 EPHA10Q5JZY3 1008 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 HOMER1Q86YM7 354 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 CCDC150Q8NCX0 1101 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 CALCOCO1Q9P1Z2 691 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 MED1Q15648 1581 aaPredicted RBP22.32■■□□□ 1.16
CLN5-205ENST00000635905 CYP2C19P33261 490 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 TRERF1Q96PN7 1200 aa22.32■■□□□ 1.16
CLN5-205ENST00000635905 PSDA5PKW4 1024 aaPredicted RBP22.31■■□□□ 1.16
CLN5-205ENST00000635905 DNAI1Q9UI46 699 aa22.31■■□□□ 1.16
CLN5-205ENST00000635905 CCDC9Q9Y3X0 531 aaKnown RBP22.31■■□□□ 1.16
CLN5-205ENST00000635905 IGKV5-2P06315 115 aa22.3■■□□□ 1.16
CLN5-205ENST00000635905 CDK11BP21127 795 aaKnown RBP22.3■■□□□ 1.16
CLN5-205ENST00000635905 ZRSR1Q15695 479 aaKnown RBP22.3■■□□□ 1.16
CLN5-205ENST00000635905 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
CLN5-205ENST00000635905 KIAA1468Q9P260 1216 aa22.3■■□□□ 1.16
CLN5-205ENST00000635905 UTYO14607 1347 aa22.3■■□□□ 1.16
CLN5-205ENST00000635905 ATP5JP18859 108 aa22.3■■□□□ 1.16
CLN5-205ENST00000635905 DHX32Q7L7V1 743 aaKnown RBP22.3■■□□□ 1.16
CLN5-205ENST00000635905 A0A0G2JLW4 131 aa22.29■■□□□ 1.16
CLN5-205ENST00000635905 MCMDC2Q4G0Z9 681 aa22.29■■□□□ 1.16
CLN5-205ENST00000635905 CHST3Q7LGC8 479 aa22.29■■□□□ 1.16
CLN5-205ENST00000635905 OTUD7BQ6GQQ9 843 aa22.29■■□□□ 1.16
CLN5-205ENST00000635905 MARF1Q9Y4F3 1742 aaKnown RBP22.29■■□□□ 1.16
CLN5-205ENST00000635905 KDM3BQ7LBC6 1761 aa22.28■■□□□ 1.16
CLN5-205ENST00000635905 HNRNPH2P55795 449 aaKnown RBP22.28■■□□□ 1.16
CLN5-205ENST00000635905 AKAP4Q5JQC9 854 aa22.28■■□□□ 1.16
CLN5-205ENST00000635905 POLR3GO15318 223 aaPredicted RBP22.28■■□□□ 1.16
CLN5-205ENST00000635905 TFCP2Q12800 502 aa22.28■■□□□ 1.16
CLN5-205ENST00000635905 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
CLN5-205ENST00000635905 ETF1P62495 437 aaKnown RBP22.27■■□□□ 1.16
CLN5-205ENST00000635905 ATL3Q6DD88 541 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 ISM2Q6H9L7 571 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 UBXN4Q92575 508 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 GCP02774 474 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 CAPN2P17655 700 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 TNNI3KQ59H18 835 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 ADALQ6DHV7 355 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 ORC3Q9UBD5 711 aaPredicted RBP22.27■■□□□ 1.16
CLN5-205ENST00000635905 CLIC4Q9Y696 253 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 FPGT-TNNI3KV9GXZ4 949 aa22.27■■□□□ 1.16
CLN5-205ENST00000635905 FANCGO15287 622 aa22.27■■□□□ 1.15
CLN5-205ENST00000635905 SEC31AO94979 1220 aaKnown RBP22.27■■□□□ 1.15
CLN5-205ENST00000635905 ZRANB2O95218 330 aaKnown RBP eCLIP22.27■■□□□ 1.15
CLN5-205ENST00000635905 FAM193AP78312 1265 aa22.27■■□□□ 1.15
CLN5-205ENST00000635905 SF3A1Q15459 793 aaKnown RBP22.27■■□□□ 1.15
CLN5-205ENST00000635905 KRT28Q7Z3Y7 464 aa22.27■■□□□ 1.15
CLN5-205ENST00000635905 RIC3Q7Z5B4 369 aa22.27■■□□□ 1.15
CLN5-205ENST00000635905 DBNDD2Q9BQY9 259 aa22.27■■□□□ 1.15
CLN5-205ENST00000635905 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.27■■□□□ 1.15
CLN5-205ENST00000635905 NEDD4P46934 1319 aa22.27■■□□□ 1.15
CLN5-205ENST00000635905 RNMTO43148 476 aaKnown RBP22.26■■□□□ 1.15
CLN5-205ENST00000635905 NCAPHQ15003 741 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 TMCO3Q6UWJ1 677 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 CREBRFQ8IUR6 639 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 SALL1Q9NSC2 1324 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 NCAPD2Q15021 1401 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 ANKARQ7Z5J8 1434 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 DDX58O95786 925 aaKnown RBP22.26■■□□□ 1.15
CLN5-205ENST00000635905 POLR3DP05423 398 aaPredicted RBP22.26■■□□□ 1.15
CLN5-205ENST00000635905 ATP1A3P13637 1013 aa22.26■■□□□ 1.15
CLN5-205ENST00000635905 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
CLN5-205ENST00000635905 STK38Q15208 465 aa22.25■■□□□ 1.15
CLN5-205ENST00000635905 IP6K1Q92551 441 aa22.25■■□□□ 1.15
CLN5-205ENST00000635905 EPC1Q9H2F5 836 aa22.25■■□□□ 1.15
CLN5-205ENST00000635905 RTEL1Q9NZ71 1219 aa22.25■■□□□ 1.15
CLN5-205ENST00000635905 URI1O94763 535 aaPredicted RBP22.25■■□□□ 1.15
CLN5-205ENST00000635905 LINC00301Q8NCQ3 95 aa22.25■■□□□ 1.15
CLN5-205ENST00000635905 NRDCO43847 1150 aa22.24■■□□□ 1.15
CLN5-205ENST00000635905 SLC3A2P08195 630 aaKnown RBP22.24■■□□□ 1.15
CLN5-205ENST00000635905 HMGB1P09429 215 aaKnown RBP22.24■■□□□ 1.15
CLN5-205ENST00000635905 FDPSP14324 419 aaKnown RBP22.24■■□□□ 1.15
CLN5-205ENST00000635905 PDIA3P30101 505 aaKnown RBP22.24■■□□□ 1.15
CLN5-205ENST00000635905 KCNJ6P48051 423 aa22.24■■□□□ 1.15
CLN5-205ENST00000635905 EXOSC10Q01780 885 aaKnown RBP22.24■■□□□ 1.15
CLN5-205ENST00000635905 PTPN21Q16825 1174 aa22.24■■□□□ 1.15
CLN5-205ENST00000635905 BPIFA3Q9BQP9 254 aa22.24■■□□□ 1.15
CLN5-205ENST00000635905 CARMIL3Q8ND23 1372 aa22.24■■□□□ 1.15
CLN5-205ENST00000635905 TULP2O00295 520 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms