RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 ATP2B3Q16720 1220 aa9.08□□□□□ -0.96
SSRP1-205ENST00000635721 DNTTIP2Q5QJE6 756 aaKnown RBP9.08□□□□□ -0.96
SSRP1-205ENST00000635721 SARM1Q6SZW1 724 aa9.08□□□□□ -0.96
SSRP1-205ENST00000635721 TICAM2Q86XR7 235 aa9.08□□□□□ -0.96
SSRP1-205ENST00000635721 LRRCC1Q9C099 1032 aa9.08□□□□□ -0.96
SSRP1-205ENST00000635721 COL24A1Q17RW2 1714 aa9.08□□□□□ -0.96
SSRP1-205ENST00000635721 DDX60Q8IY21 1712 aaKnown RBP9.08□□□□□ -0.96
SSRP1-205ENST00000635721 RAD50Q92878 1312 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 LAMB2P55268 1798 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 H7C1W4 665 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 RIOK3O14730 519 aaKnown RBP9.07□□□□□ -0.96
SSRP1-205ENST00000635721 GADD45BO75293 160 aaPredicted RBP9.07□□□□□ -0.96
SSRP1-205ENST00000635721 ALDH1L1O75891 902 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 FGD1P98174 961 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 DDR1Q08345 913 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 NEXNQ0ZGT2 675 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 TRIM28Q13263 835 aaKnown RBP9.07□□□□□ -0.96
SSRP1-205ENST00000635721 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 VPS53Q5VIR6 699 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 CLEC4GQ6UXB4 293 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 NUTM1Q86Y26 1132 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 TDRD7Q8NHU6 1098 aaKnown RBP9.07□□□□□ -0.96
SSRP1-205ENST00000635721 FAM89AQ96GI7 184 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 KAZALD1Q96I82 304 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 SUCLG2Q96I99 432 aa9.07□□□□□ -0.96
SSRP1-205ENST00000635721 CWC25Q9NXE8 425 aaPredicted RBP9.07□□□□□ -0.96
SSRP1-205ENST00000635721 MYH3P11055 1940 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 CCDC66A2RUB6 948 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 SGSM2O43147 1006 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 ZBTB7AO95365 584 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 NTSR2O95665 410 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 PDCP20941 246 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 SYT1P21579 422 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 HSP90AB3PQ58FF7 597 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 PLA2G4DQ86XP0 818 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 CCDC191Q8NCU4 936 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 RNF214Q8ND24 703 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 OTUD7AQ8TE49 926 aaPredicted RBP9.06□□□□□ -0.96
SSRP1-205ENST00000635721 SSH3Q8TE77 659 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 TSPYL1Q9H0U9 437 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 KCNF1Q9H3M0 494 aa9.06□□□□□ -0.96
SSRP1-205ENST00000635721 DDX19AQ9NUU7 478 aaKnown RBP9.06□□□□□ -0.96
SSRP1-205ENST00000635721 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
SSRP1-205ENST00000635721 ATF5Q9Y2D1 282 aaPredicted RBP9.06□□□□□ -0.96
SSRP1-205ENST00000635721 ANKRD31Q8N7Z5 1873 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 GRM8O00222 908 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 POLRMTO00411 1230 aaKnown RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 ATP8B1O43520 1251 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 SERPINB2P05120 415 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 HCLS1P14317 486 aaPredicted RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 HMGB2P26583 209 aaKnown RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 NCBP1Q09161 790 aaKnown RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 ERFEQ4G0M1 354 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 C3orf67Q6ZVT6 689 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 UBE3BQ7Z3V4 1068 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 SETDB2Q96T68 719 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 UTP14AQ9BVJ6 771 aaKnown RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 SCAND2PQ9GZW5 306 aaPredicted RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 TTC12Q9H892 705 aaPredicted RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 TRMT112Q9UI30 125 aaKnown RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 ZNF652Q9Y2D9 606 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 LRRFIP2Q9Y608 721 aaKnown RBP9.05□□□□□ -0.96
SSRP1-205ENST00000635721 NRXN2Q9P2S2 1712 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 UTYO14607 1347 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
SSRP1-205ENST00000635721 PCCAP05165 728 aaPredicted RBP9.04□□□□□ -0.96
SSRP1-205ENST00000635721 FOXO4P98177 505 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 POLA2Q14181 598 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 HSP90AB4PQ58FF6 505 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 ATL3Q6DD88 541 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 NLGN1Q8N2Q7 840 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 ZBTB38Q8NAP3 1195 aaPredicted RBP9.04□□□□□ -0.96
SSRP1-205ENST00000635721 MRFAP1L1Q96HT8 127 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
SSRP1-205ENST00000635721 LSG1Q9H089 658 aaKnown RBP9.04□□□□□ -0.96
SSRP1-205ENST00000635721 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 PALD1Q9ULE6 856 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 MTMR6Q9Y217 621 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 COL4A1P02462 1669 aa9.04□□□□□ -0.96
SSRP1-205ENST00000635721 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
SSRP1-205ENST00000635721 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 SOCS7O14512 581 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 IRS4O14654 1257 aaPredicted RBP9.03□□□□□ -0.96
SSRP1-205ENST00000635721 CTAGE5O15320 804 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 MMP10P09238 476 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 UBTFL1P0CB47 393 aaPredicted RBP9.03□□□□□ -0.96
SSRP1-205ENST00000635721 CBX1P83916 185 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 TERF2Q15554 542 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 MAP3K11Q16584 847 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 PARP10Q53GL7 1025 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 PRR5LQ6MZQ0 368 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 NYAP1Q6ZVC0 841 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 PPP1R42Q7Z4L9 355 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 ZNF397Q8NF99 534 aaPredicted RBP9.03□□□□□ -0.96
SSRP1-205ENST00000635721 RUFY2Q8WXA3 655 aa9.03□□□□□ -0.96
SSRP1-205ENST00000635721 BICC1Q9H694 974 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms