RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 TNIP1Q15025 636 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
COL11A1-211ENST00000635193 STAT6P42226 847 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 CETN1Q12798 172 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 MAP2K2P36507 400 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 TTC14Q96N46 770 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
COL11A1-211ENST00000635193 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 PER1O15534 1290 aaPredicted RBP13.25□□□□□ -0.29
COL11A1-211ENST00000635193 C17orf53Q8N3J3 647 aaPredicted RBP13.25□□□□□ -0.29
COL11A1-211ENST00000635193 KRT23Q9C075 422 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 LRRC27Q9C0I9 530 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 CAPZA3Q96KX2 299 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 KAT14Q9H8E8 782 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
COL11A1-211ENST00000635193 RTN1Q16799 776 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 DHX58Q96C10 678 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 SELENOSQ9BQE4 189 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 TSPY2A6NKD2 308 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 GRM8O00222 908 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 PRC1O43663 620 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 NBPF7P0C2Y1 421 aaPredicted RBP13.24□□□□□ -0.29
COL11A1-211ENST00000635193 LACTBP83111 547 aaPredicted RBP13.24□□□□□ -0.29
COL11A1-211ENST00000635193 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 SEPT6Q14141 434 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 GUCA1BQ9UMX6 200 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 PSMA7O14818 248 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 VAV2P52735 878 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 KIF5AQ12840 1032 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 LMBRD1Q9NUN5 540 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 SAMD15Q9P1V8 674 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 NDUFAB1O14561 156 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
COL11A1-211ENST00000635193 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
COL11A1-211ENST00000635193 PDE4BQ07343 736 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 TMTC2Q8N394 836 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 MYCBPQ99417 103 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 GPTP24298 496 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 MXRA7P84157 204 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 BAG1Q99933 345 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 FAM160A1Q05DH4 1040 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 BRAPQ7Z569 592 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 SPAG5Q96R06 1193 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 PAIP2Q9BPZ3 127 aaKnown RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 ACEP12821 1306 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 CFAP58Q5T655 872 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
COL11A1-211ENST00000635193 CRACR2BQ8N4Y2 399 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-211ENST00000635193 RAD50Q92878 1312 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 UQCRFS1P1P0C7P4 283 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 CPA1P15085 419 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 MYL5Q02045 173 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 DDX12PQ92771 950 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
COL11A1-211ENST00000635193 CTNNA2P26232 953 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 ZNF75DP51815 510 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 STX17P56962 302 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 DMTNQ08495 405 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 CCDC50Q8IVM0 306 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 MKRN1Q9UHC7 482 aaKnown RBP13.22□□□□□ -0.29
COL11A1-211ENST00000635193 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 DHX32Q7L7V1 743 aaKnown RBP13.22□□□□□ -0.29
COL11A1-211ENST00000635193 CUL5Q93034 780 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 RASAL2Q9UJF2 1139 aa13.22□□□□□ -0.29
COL11A1-211ENST00000635193 MSH6P52701 1360 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.29
COL11A1-211ENST00000635193 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-211ENST00000635193 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 VAT1LQ9HCJ6 419 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 POLKQ9UBT6 870 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-211ENST00000635193 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-211ENST00000635193 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 CLSTN2Q9H4D0 955 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 PAG1Q9NWQ8 432 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 STIM2Q9P246 746 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 UBXN1Q04323 297 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 PPFIBP2Q8ND30 876 aa13.21□□□□□ -0.29
COL11A1-211ENST00000635193 NEBLO76041 1014 aa13.21□□□□□ -0.3
COL11A1-211ENST00000635193 KRT24Q2M2I5 525 aa13.21□□□□□ -0.3
COL11A1-211ENST00000635193 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.3
COL11A1-211ENST00000635193 A6NNZ2 444 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms