RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 MROH5Q6ZUA9 1318 aa19.63■□□□□ 0.73
LINC00339-207ENST00000634712 SNAP23O00161 211 aa19.62■□□□□ 0.73
LINC00339-207ENST00000634712 KLRK1P26718 216 aa19.62■□□□□ 0.73
LINC00339-207ENST00000634712 HTRA3P83110 453 aa19.62■□□□□ 0.73
LINC00339-207ENST00000634712 RBM26Q5T8P6 1007 aaKnown RBP19.62■□□□□ 0.73
LINC00339-207ENST00000634712 ZNF804AQ7Z570 1209 aa19.62■□□□□ 0.73
LINC00339-207ENST00000634712 MEIS3Q99687 375 aa19.62■□□□□ 0.73
LINC00339-207ENST00000634712 RIPOR2Q9Y4F9 1068 aa19.62■□□□□ 0.73
LINC00339-207ENST00000634712 LRRFIP2Q9Y608 721 aaKnown RBP19.62■□□□□ 0.73
LINC00339-207ENST00000634712 CEP350Q5VT06 3117 aa19.61■□□□□ 0.73
LINC00339-207ENST00000634712 SHTN1A0MZ66 631 aa19.61■□□□□ 0.73
LINC00339-207ENST00000634712 ITGBL1O95965 494 aaPredicted RBP19.61■□□□□ 0.73
LINC00339-207ENST00000634712 UBE4AQ14139 1066 aa19.61■□□□□ 0.73
LINC00339-207ENST00000634712 METTL24Q5JXM2 366 aa19.61■□□□□ 0.73
LINC00339-207ENST00000634712 C15orf52Q6ZUT6 534 aaKnown RBP19.61■□□□□ 0.73
LINC00339-207ENST00000634712 FTSJ3Q8IY81 847 aaKnown RBP19.61■□□□□ 0.73
LINC00339-207ENST00000634712 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
LINC00339-207ENST00000634712 LRRC24Q50LG9 513 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 STRIP1Q5VSL9 837 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 TTLL5Q6EMB2 1281 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 SAMD7Q7Z3H4 446 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 KLHDC4Q8TBB5 520 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 ZC3H15Q8WU90 426 aaKnown RBP19.6■□□□□ 0.73
LINC00339-207ENST00000634712 CD209Q9NNX6 404 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 TNNQ9UQP3 1299 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 SCN9AQ15858 1988 aa19.6■□□□□ 0.73
LINC00339-207ENST00000634712 TRPM4Q8TD43 1214 aa19.59■□□□□ 0.73
LINC00339-207ENST00000634712 PASKQ96RG2 1323 aa19.59■□□□□ 0.73
LINC00339-207ENST00000634712 USP17L8P0C7I0 530 aa19.58■□□□□ 0.73
LINC00339-207ENST00000634712 HIRAP54198 1017 aaPredicted RBP19.58■□□□□ 0.73
LINC00339-207ENST00000634712 GTF2IP78347 998 aa19.58■□□□□ 0.73
LINC00339-207ENST00000634712 CREBZFQ9NS37 354 aa19.58■□□□□ 0.73
LINC00339-207ENST00000634712 ADAMTSL1Q8N6G6 1762 aa19.58■□□□□ 0.73
LINC00339-207ENST00000634712 MYO3BQ8WXR4 1341 aa19.58■□□□□ 0.72
LINC00339-207ENST00000634712 DACT2Q5SW24 774 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 DZIP1LQ8IYY4 767 aaKnown RBP19.57■□□□□ 0.72
LINC00339-207ENST00000634712 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 TMEM57Q8N5G2 664 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 TMEM88BA6NKF7 163 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 EYA2O00167 538 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 PDE8BO95263 885 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 GNAI2P04899 355 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 RFX5P48382 616 aaPredicted RBP19.57■□□□□ 0.72
LINC00339-207ENST00000634712 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
LINC00339-207ENST00000634712 KIF4BQ2VIQ3 1234 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 VPS37DQ86XT2 251 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 DNAJC5GQ8N7S2 189 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 PGAP2Q9UHJ9 254 aa19.57■□□□□ 0.72
LINC00339-207ENST00000634712 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
LINC00339-207ENST00000634712 ZNF280AP59817 542 aaPredicted RBP19.56■□□□□ 0.72
LINC00339-207ENST00000634712 CAVIN4Q5BKX8 364 aa19.56■□□□□ 0.72
LINC00339-207ENST00000634712 CDC37L1Q7L3B6 337 aa19.56■□□□□ 0.72
LINC00339-207ENST00000634712 DCPSQ96C86 337 aaKnown RBP19.56■□□□□ 0.72
LINC00339-207ENST00000634712 GMLQ99445 158 aa19.56■□□□□ 0.72
LINC00339-207ENST00000634712 MXD3Q9BW11 206 aa19.56■□□□□ 0.72
LINC00339-207ENST00000634712 SIL1Q9H173 461 aa19.56■□□□□ 0.72
LINC00339-207ENST00000634712 IRS2Q9Y4H2 1338 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 IL1R1P14778 569 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 ITPRIPQ8IWB1 547 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 KLRG1Q96E93 195 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 MYOZ2Q9NPC6 264 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 FBXO3Q9UK99 471 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 HDAC9Q9UKV0 1011 aa19.55■□□□□ 0.72
LINC00339-207ENST00000634712 ZNF609O15014 1411 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 PSME4Q14997 1843 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 EGFRP00533 1210 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 MS4A1P11836 297 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 GYG1P46976 350 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 MMP14P50281 582 aa19.54■□□□□ 0.72
LINC00339-207ENST00000634712 GLIS2Q9BZE0 524 aaPredicted RBP19.54■□□□□ 0.72
LINC00339-207ENST00000634712 A0A1B0GUL6 1792 aa19.53■□□□□ 0.72
LINC00339-207ENST00000634712 TRAF5O00463 557 aa19.53■□□□□ 0.72
LINC00339-207ENST00000634712 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
LINC00339-207ENST00000634712 CIAO1O76071 339 aa19.53■□□□□ 0.72
LINC00339-207ENST00000634712 IFIT1P09914 478 aaKnown RBP19.53■□□□□ 0.72
LINC00339-207ENST00000634712 PUM3Q15397 648 aaKnown RBP19.53■□□□□ 0.72
LINC00339-207ENST00000634712 FAM84BQ96KN1 310 aaPredicted RBP19.53■□□□□ 0.72
LINC00339-207ENST00000634712 CEP126Q9P2H0 1117 aa19.53■□□□□ 0.72
LINC00339-207ENST00000634712 SASH1O94885 1247 aa19.52■□□□□ 0.72
LINC00339-207ENST00000634712 SCARF1Q14162 830 aa19.52■□□□□ 0.72
LINC00339-207ENST00000634712 USP48Q86UV5 1035 aa19.52■□□□□ 0.72
LINC00339-207ENST00000634712 KIAA0825Q8IV33 1275 aa19.52■□□□□ 0.72
LINC00339-207ENST00000634712 VGLL2Q8N8G2 317 aa19.52■□□□□ 0.72
LINC00339-207ENST00000634712 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.72
LINC00339-207ENST00000634712 SLC5A1P13866 664 aa19.51■□□□□ 0.71
LINC00339-207ENST00000634712 IL15P40933 162 aaPredicted RBP19.51■□□□□ 0.71
LINC00339-207ENST00000634712 FMR1Q06787 632 aaKnown RBP eCLIP19.51■□□□□ 0.71
LINC00339-207ENST00000634712 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
LINC00339-207ENST00000634712 KRT26Q7Z3Y9 468 aa19.51■□□□□ 0.71
LINC00339-207ENST00000634712 COPRSQ9NQ92 184 aa19.51■□□□□ 0.71
LINC00339-207ENST00000634712 ABT1Q9ULW3 272 aaKnown RBP19.51■□□□□ 0.71
LINC00339-207ENST00000634712 PA2G4Q9UQ80 394 aaKnown RBP19.51■□□□□ 0.71
LINC00339-207ENST00000634712 FBXO33Q7Z6M2 555 aa19.5■□□□□ 0.71
LINC00339-207ENST00000634712 SULF1Q8IWU6 871 aa19.5■□□□□ 0.71
LINC00339-207ENST00000634712 TDRD7Q8NHU6 1098 aaKnown RBP19.5■□□□□ 0.71
LINC00339-207ENST00000634712 LPIN2Q92539 896 aa19.5■□□□□ 0.71
LINC00339-207ENST00000634712 ZNF408Q9H9D4 720 aa19.5■□□□□ 0.71
LINC00339-207ENST00000634712 GGA3Q9NZ52 723 aa19.5■□□□□ 0.71
LINC00339-207ENST00000634712 MKRN1Q9UHC7 482 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms