RNA–Protein interactions for RNA: ENST00000630858.2

DDX3X-221, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-221ENST00000630858 RCOR1Q9UKL0 485 aa11.43□□□□□ -0.58
DDX3X-221ENST00000630858 RRP15Q9Y3B9 282 aaKnown RBP11.43□□□□□ -0.58
DDX3X-221ENST00000630858 ITSN1Q15811 1721 aa11.43□□□□□ -0.58
DDX3X-221ENST00000630858 GNAT3A8MTJ3 354 aa11.43□□□□□ -0.58
DDX3X-221ENST00000630858 GTF2A1P52655 376 aaPredicted RBP11.43□□□□□ -0.58
DDX3X-221ENST00000630858 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
DDX3X-221ENST00000630858 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
DDX3X-221ENST00000630858 ZSWIM4Q9H7M6 989 aa11.43□□□□□ -0.58
DDX3X-221ENST00000630858 USP42Q9H9J4 1324 aaKnown RBP11.43□□□□□ -0.58
DDX3X-221ENST00000630858 TUBB4AP04350 444 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 GNG11P61952 73 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 CCT2P78371 535 aaKnown RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 LEKR1Q6ZMV7 388 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 MRPS27Q92552 414 aaKnown RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 NPHP4O75161 1426 aaPredicted RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 DHX16O60231 1041 aaKnown RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 SERPINC1P01008 464 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 GOLGA6L1Q8N7Z2 621 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 GOLGA5Q8TBA6 731 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 ADD1P35611 737 aaKnown RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 SCRN1Q12765 414 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 ABTB2Q8N961 1025 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 ENGASEQ8NFI3 743 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 CHMP4CQ96CF2 233 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 EDC3Q96F86 508 aaKnown RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 TLR7Q9NYK1 1049 aaKnown RBP11.42□□□□□ -0.58
DDX3X-221ENST00000630858 CHPF2Q9P2E5 772 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
DDX3X-221ENST00000630858 ATP1A3P13637 1013 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 NDUFA8P51970 172 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 PPP2R3AQ06190 1150 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 SRLQ86TD4 932 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 FBXO18Q8NFZ0 1043 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 EYA1Q99502 592 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 HMG20BQ9P0W2 317 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 ATP8B1O43520 1251 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 FANCCQ00597 558 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 MCM6Q14566 821 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 TRIM65Q6PJ69 517 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 ERC1Q8IUD2 1116 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 SEC62Q99442 399 aaKnown RBP11.41□□□□□ -0.58
DDX3X-221ENST00000630858 PARD6BQ9BYG5 372 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 VPS18Q9P253 973 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 KIAA1468Q9P260 1216 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 PCDHA7Q9UN72 937 aa11.41□□□□□ -0.58
DDX3X-221ENST00000630858 FANCGO15287 622 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 SLC3A2P08195 630 aaKnown RBP11.4□□□□□ -0.58
DDX3X-221ENST00000630858 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.588e-7■■□□□ 12.9
DDX3X-221ENST00000630858 STK38Q15208 465 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 NCOA5Q9HCD5 579 aaKnown RBP11.4□□□□□ -0.58
DDX3X-221ENST00000630858 TOMM22Q9NS69 142 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 NALCNQ8IZF0 1738 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 KRT32Q14532 448 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 NRKQ7Z2Y5 1582 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 REXO1L1PQ8IX06 675 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 GPR161Q8N6U8 529 aaKnown RBP11.4□□□□□ -0.58
DDX3X-221ENST00000630858 PDILTQ8N807 584 aa11.4□□□□□ -0.58
DDX3X-221ENST00000630858 EAF2Q96CJ1 260 aaPredicted RBP11.4□□□□□ -0.58
DDX3X-221ENST00000630858 H3BQF6 201 aa11.4□□□□□ -0.59
DDX3X-221ENST00000630858 ZSCAN12O43309 604 aa11.4□□□□□ -0.59
DDX3X-221ENST00000630858 UBASH3AP57075 661 aa11.4□□□□□ -0.59
DDX3X-221ENST00000630858 NOM1Q5C9Z4 860 aaKnown RBP11.4□□□□□ -0.59
DDX3X-221ENST00000630858 CCDC129Q6ZRS4 1044 aa11.4□□□□□ -0.59
DDX3X-221ENST00000630858 FMR1NBQ8N0W7 255 aaPredicted RBP11.4□□□□□ -0.59
DDX3X-221ENST00000630858 IL17REQ8NFR9 667 aa11.4□□□□□ -0.59
DDX3X-221ENST00000630858 EXOC4Q96A65 974 aa11.4□□□□□ -0.59
DDX3X-221ENST00000630858 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 ACTN2P35609 894 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 NOP2P46087 812 aaKnown RBP11.39□□□□□ -0.59
DDX3X-221ENST00000630858 KCNJ6P48051 423 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 APOBRQ0VD83 1088 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 HSP90AA4PQ58FG1 418 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.39□□□□□ -0.59
DDX3X-221ENST00000630858 KDM4FA0A1W2PPD8 638 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 DHX8Q14562 1220 aaKnown RBP11.39□□□□□ -0.59
DDX3X-221ENST00000630858 LONRF2Q1L5Z9 754 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 NAA16Q6N069 864 aaPredicted RBP11.39□□□□□ -0.59
DDX3X-221ENST00000630858 WDR24Q96S15 920 aa11.39□□□□□ -0.59
DDX3X-221ENST00000630858 ANKRD65E5RJM6 399 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 TAF5LO75529 589 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 POLR3DP05423 398 aaPredicted RBP11.38□□□□□ -0.59
DDX3X-221ENST00000630858 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
DDX3X-221ENST00000630858 NSUN7Q8NE18 718 aaKnown RBP11.38□□□□□ -0.59
DDX3X-221ENST00000630858 FUT8Q9BYC5 575 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 UBXN6Q9BZV1 441 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 ALDH8A1Q9H2A2 487 aaPredicted RBP11.38□□□□□ -0.59
DDX3X-221ENST00000630858 FMN2Q9NZ56 1722 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 TEFQ10587 303 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 DPF2Q92785 391 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 PPP2R2CQ9Y2T4 447 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
DDX3X-221ENST00000630858 CHGBP05060 677 aa11.38□□□□□ -0.59
DDX3X-221ENST00000630858 SKIDA1Q1XH10 827 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms