RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 LRRC8AQ8IWT6 810 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 IQCF2Q8IXL9 164 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 DRC7Q8IY82 874 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CCDC170Q8IYT3 715 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 RNF168Q8IYW5 571 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 SAMD3Q8N6K7 520 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 GBP7Q8N8V2 638 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 SPDYE1Q8NFV5 336 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 KCNV2Q8TDN2 545 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 PANK1Q8TE04 598 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 HDAC7Q8WUI4 952 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 NUP133Q8WUM0 1156 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CACTINQ8WUQ7 758 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 HNRNPLLQ8WVV9 542 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 TBC1D5Q92609 795 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 RABGGTAQ92696 567 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 GOLGA1Q92805 767 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 TEKT1Q969V4 418 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CCDC47Q96A33 483 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 ZBTB10Q96DT7 871 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CCDC114Q96M63 670 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CFAP53Q96M91 514 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 MPHOSPH6Q99547 160 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 MPHOSPH9Q99550 1183 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 PAGR1Q9BTK6 254 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 POLR3CQ9BUI4 534 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 TRIM4Q9C037 500 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 GBP3Q9H0R5 595 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 UNC45AQ9H3U1 944 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 BICC1Q9H694 974 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 VCPKMTQ9H867 229 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 ACTR5Q9H9F9 607 aaPredicted RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 INCENPQ9NQS7 918 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 TMOD4Q9NZQ9 345 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 DDX19BQ9UMR2 479 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 WDR37Q9Y2I8 494 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 FAN1Q9Y2M0 1017 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 RIPOR2Q9Y4F9 1068 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 PCDHB15Q9Y5E8 787 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 ATP6V1DQ9Y5K8 247 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 FAM169AQ9Y6X4 670 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 URB2Q14146 1524 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 MAGI3Q5TCQ9 1506 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 AKAP12Q02952 1782 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 CADPSQ9ULU8 1353 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 ADCY10Q96PN6 1610 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 MAGI2Q86UL8 1455 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 WDR7Q9Y4E6 1490 aa2.2□□□□□ -2.06
TCF4-264ENST00000628391 SETD1AO15047 1707 aaKnown RBP2.2□□□□□ -2.06
TCF4-264ENST00000628391 ZNF644Q9H582 1327 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 TTC37Q6PGP7 1564 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CPSF1Q10570 1443 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 PRAG1Q86YV5 1406 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 HMGXB3Q12766 1538 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GOLGA6L7A0A1B0GV03 622 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ERICH2A1L162 156 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CCDC69A6NI79 296 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SPDYE3A6NKU9 549 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 A6NNZ2 444 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GOLGA6L19H0YKK7 550 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ABLIM1O14639 778 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 KIF3BO15066 747 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PER1O15534 1290 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 CREB3O43889 395 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ZEB2O60315 1214 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 ATP6V1G1O75348 118 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 E2F6O75461 281 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SMNDC1O75940 238 aaKnown RBP eCLIP2.19□□□□□ -2.06
TCF4-264ENST00000628391 ECM2O94769 699 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 LUC7L3O95232 432 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 TUBBP07437 444 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 HARSP12081 509 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 ZNF24P17028 368 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SYT1P21579 422 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 EIF4BP23588 611 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 RPL13P26373 211 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 FLT3P36888 993 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 FNTAP49354 379 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 AARSP49588 968 aaKnown RBP eCLIP2.19□□□□□ -2.06
TCF4-264ENST00000628391 PAPOLAP51003 745 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 SMTNP53814 917 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 RARSP54136 660 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 SH3BGRP55822 239 aaPredicted RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 EVCP57679 992 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MAP3K9P80192 1104 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PPP2R3AQ06190 1150 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CCDC15Q0P6D6 951 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 PABPC4Q13310 644 aaKnown RBP eCLIP2.19□□□□□ -2.06
TCF4-264ENST00000628391 DYNC1I2Q13409 638 aaKnown RBP2.19□□□□□ -2.06
TCF4-264ENST00000628391 CUL3Q13618 768 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MAP3K11Q16584 847 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 INF2Q27J81 1249 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 CCDC57Q2TAC2 916 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 KIF4BQ2VIQ3 1234 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 SLC4A8Q2Y0W8 1093 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 TUBB8Q3ZCM7 444 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 AKNAD1Q5T1N1 836 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 GORABQ5T7V8 394 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 MFSD4BQ5TF39 518 aa2.19□□□□□ -2.06
TCF4-264ENST00000628391 WDR78Q5VTH9 848 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms