RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 CKAP2LQ8IYA6 745 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 C6orf50Q9HD87 102 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 CHL1O00533 1208 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 ZBED4O75132 1171 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 SERPINB2P05120 415 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 CWF19L2Q2TBE0 894 aaKnown RBP13.58□□□□□ -0.24
CHD2-205ENST00000625662 ZNF710Q8N1W2 664 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 LGR6Q9HBX8 967 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 VPS72Q15906 364 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 CCDC125Q86Z20 511 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
CHD2-205ENST00000625662 FERMT2Q96AC1 680 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 MAP3K15Q6ZN16 1313 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 NOD1Q9Y239 953 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 CCP110O43303 1012 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 VAMP4O75379 141 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 GCKRQ14397 625 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 SPATA32Q96LK8 384 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 MEIS3Q99687 375 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 RAD50Q92878 1312 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
CHD2-205ENST00000625662 PIM2Q9P1W9 311 aa13.57□□□□□ -0.24
CHD2-205ENST00000625662 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 CALML3P27482 149 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
CHD2-205ENST00000625662 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 ARMC9Q7Z3E5 817 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 GOPCQ9HD26 462 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 DHX37Q8IY37 1157 aaKnown RBP13.56□□□□□ -0.24
CHD2-205ENST00000625662 SMCR8Q8TEV9 937 aaPredicted RBP13.56□□□□□ -0.24
CHD2-205ENST00000625662 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
CHD2-205ENST00000625662 NCOA3Q9Y6Q9 1424 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 DKC1O60832 514 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHD2-205ENST00000625662 NPR1P16066 1061 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 CDR1P51861 262 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
CHD2-205ENST00000625662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
CHD2-205ENST00000625662 ZBTB43O43298 467 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 FIBPO43427 364 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 BICC1Q9H694 974 aaKnown RBP13.55□□□□□ -0.24
CHD2-205ENST00000625662 PCCAP05165 728 aaPredicted RBP13.55□□□□□ -0.24
CHD2-205ENST00000625662 CETN2P41208 172 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
CHD2-205ENST00000625662 PALLDQ8WX93 1383 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 CTSWP56202 376 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 RTN1Q16799 776 aa13.55□□□□□ -0.24
CHD2-205ENST00000625662 XDHP47989 1333 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 HDAC1Q13547 482 aaPredicted RBP13.54□□□□□ -0.24
CHD2-205ENST00000625662 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
CHD2-205ENST00000625662 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 GNA11P29992 359 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 TFCP2Q12800 502 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
CHD2-205ENST00000625662 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 GPS2Q13227 327 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 ZBTB38Q8NAP3 1195 aaPredicted RBP13.54□□□□□ -0.24
CHD2-205ENST00000625662 TBCAO75347 108 aaKnown RBP13.54□□□□□ -0.24
CHD2-205ENST00000625662 PDILTQ8N807 584 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 HELLSQ9NRZ9 838 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
CHD2-205ENST00000625662 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
CHD2-205ENST00000625662 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
CHD2-205ENST00000625662 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
CHD2-205ENST00000625662 PPFIBP1Q86W92 1011 aa13.53□□□□□ -0.24
CHD2-205ENST00000625662 NAPAP54920 295 aa13.53□□□□□ -0.24
CHD2-205ENST00000625662 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 DDX11Q96FC9 970 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 SEMA3EO15041 775 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 CCDC184Q52MB2 194 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 CLEC4GQ6UXB4 293 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 MICU3Q86XE3 530 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 SCAND2PQ9GZW5 306 aaPredicted RBP13.52□□□□□ -0.24
CHD2-205ENST00000625662 DEF6Q9H4E7 631 aa13.52□□□□□ -0.24
CHD2-205ENST00000625662 SMTNL1A8MU46 457 aa13.52□□□□□ -0.25
CHD2-205ENST00000625662 PARP1P09874 1014 aaKnown RBP13.52□□□□□ -0.25
CHD2-205ENST00000625662 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
CHD2-205ENST00000625662 IGSF1Q8N6C5 1336 aa13.52□□□□□ -0.25
CHD2-205ENST00000625662 GIGYF1O75420 1035 aaPredicted RBP13.52□□□□□ -0.25
CHD2-205ENST00000625662 HAND2P61296 217 aa13.52□□□□□ -0.25
CHD2-205ENST00000625662 TTC22Q5TAA0 569 aa13.52□□□□□ -0.25
CHD2-205ENST00000625662 GTPBP4Q9BZE4 634 aaKnown RBP13.52□□□□□ -0.25
CHD2-205ENST00000625662 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 CCNA1P78396 465 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 TNMDQ9H2S6 317 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 STK24Q9Y6E0 443 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 PLA2R1Q13018 1463 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 CRB1P82279 1406 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
CHD2-205ENST00000625662 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms