RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 CCDC171Q6TFL3 1326 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 WTIPA6NIX2 430 aaPredicted RBP11.96□□□□□ -0.49
LINC01943-201ENST00000625410 RFC4P35249 363 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 MCAMP43121 646 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 PHKA1P46020 1223 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 COL9A3Q14050 684 aaPredicted RBP11.96□□□□□ -0.49
LINC01943-201ENST00000625410 ZNF784Q8NCA9 323 aaPredicted RBP11.96□□□□□ -0.49
LINC01943-201ENST00000625410 SEC62Q99442 399 aaKnown RBP11.96□□□□□ -0.49
LINC01943-201ENST00000625410 MTFR1LQ9H019 292 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 DIAPH3Q9NSV4 1193 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 PAG1Q9NWQ8 432 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
LINC01943-201ENST00000625410 NRXN2Q9P2S2 1712 aa11.96□□□□□ -0.49
LINC01943-201ENST00000625410 IRS2Q9Y4H2 1338 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 GOLIM4O00461 696 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 TAF5LO75529 589 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
LINC01943-201ENST00000625410 ARID4AP29374 1257 aaPredicted RBP11.95□□□□□ -0.5
LINC01943-201ENST00000625410 ZAP70P43403 619 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 ANAPC15P60006 121 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 CHRNDQ07001 517 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 BECN1Q14457 450 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 PRR5LQ6MZQ0 368 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
LINC01943-201ENST00000625410 FHDC1Q9C0D6 1143 aaPredicted RBP11.95□□□□□ -0.5
LINC01943-201ENST00000625410 NYXQ9GZU5 481 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 SNX14Q9Y5W7 946 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 TAF6LQ9Y6J9 622 aa11.95□□□□□ -0.5
LINC01943-201ENST00000625410 COL1A1P02452 1464 aaPredicted RBP11.95□□□□□ -0.5
LINC01943-201ENST00000625410 HIP1O00291 1037 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 FOXP2O15409 715 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 PUM3Q15397 648 aaKnown RBP11.94□□□□□ -0.5
LINC01943-201ENST00000625410 ZMYM1Q5SVZ6 1142 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 CCDC102BQ68D86 513 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 CCDC129Q6ZRS4 1044 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 LPIN2Q92539 896 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
LINC01943-201ENST00000625410 POLRMTO00411 1230 aaKnown RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 IGHMBP2P38935 993 aaKnown RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 TTC39AQ5SRH9 613 aa11.93□□□□□ -0.5
LINC01943-201ENST00000625410 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 BSDC1Q9NW68 430 aaPredicted RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 MINPP1Q9UNW1 487 aa11.93□□□□□ -0.5
LINC01943-201ENST00000625410 RBM8AQ9Y5S9 174 aaKnown RBP11.93□□□□□ -0.5
LINC01943-201ENST00000625410 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
LINC01943-201ENST00000625410 DOCK2Q92608 1830 aa11.93□□□□□ -0.5
LINC01943-201ENST00000625410 ZNF804BA4D1E1 1349 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 MAST3O60307 1309 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 K7ELQ4 463 aaPredicted RBP11.92□□□□□ -0.5
LINC01943-201ENST00000625410 M0R2C6 588 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 ZBTB22O15209 634 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 CYP2E1P05181 493 aaPredicted RBP11.92□□□□□ -0.5
LINC01943-201ENST00000625410 CCDC158Q5M9N0 1113 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 ANKRD18AQ8IVF6 992 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 HSCBQ8IWL3 235 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 RUFY2Q8WXA3 655 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 TTC14Q96N46 770 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
LINC01943-201ENST00000625410 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 HMG20BQ9P0W2 317 aa11.92□□□□□ -0.5
LINC01943-201ENST00000625410 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
LINC01943-201ENST00000625410 MYO5AQ9Y4I1 1855 aaKnown RBP11.91□□□□□ -0.5
LINC01943-201ENST00000625410 SERPINB2P05120 415 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 KLRK1P26718 216 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 RASGRF1Q13972 1273 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 OSBP2Q969R2 916 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 LRRC37AA6NMS7 1700 aa11.91□□□□□ -0.5
LINC01943-201ENST00000625410 A0A0G2JLW4 131 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 TCRBV5S4A2TA0A5A2 114 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
LINC01943-201ENST00000625410 SLC27A2O14975 620 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 RNF113AO15541 343 aaKnown RBP11.9□□□□□ -0.5
LINC01943-201ENST00000625410 SLC5A1P13866 664 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 BCAMP50895 628 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
LINC01943-201ENST00000625410 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
LINC01943-201ENST00000625410 CNBD1Q8NA66 436 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 NLRP3Q96P20 1036 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 SLKQ9H2G2 1235 aaPredicted RBP11.9□□□□□ -0.5
LINC01943-201ENST00000625410 HELLSQ9NRZ9 838 aa11.9□□□□□ -0.5
LINC01943-201ENST00000625410 MYH7P12883 1935 aa11.9□□□□□ -0.51
LINC01943-201ENST00000625410 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
LINC01943-201ENST00000625410 MCCP23508 829 aa11.89□□□□□ -0.51
LINC01943-201ENST00000625410 FKBP4Q02790 459 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01943-201ENST00000625410 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
LINC01943-201ENST00000625410 SPRYD3Q8NCJ5 442 aa11.89□□□□□ -0.51
LINC01943-201ENST00000625410 UPF3BQ9BZI7 483 aaKnown RBP11.89□□□□□ -0.51
LINC01943-201ENST00000625410 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
LINC01943-201ENST00000625410 CHD4Q14839 1912 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms