RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ARHGAP23Q9P227 1491 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 RIOK3O14730 519 aaKnown RBP6.46□□□□□ -1.38
ERCC6-213ENST00000624341 ZBTB7BO15156 539 aaPredicted RBP6.46□□□□□ -1.38
ERCC6-213ENST00000624341 AKR1B10O60218 316 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 STARD3NLO95772 234 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 GPTP24298 496 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 UBA7P41226 1012 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 ALS2CR12Q96Q35 445 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 OGFRQ9NZT2 677 aa6.46□□□□□ -1.38
ERCC6-213ENST00000624341 ANKRD36BQ8N2N9 1353 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 GSTTP1A0A1W2PQM5 241 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 NOP2P46087 812 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 VPS36Q86VN1 386 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 INCENPQ9NQS7 918 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 EFCAB6Q5THR3 1501 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 CCDC175P0C221 793 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 TRIM21P19474 475 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 PRPF4BQ13523 1007 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 LDHAL6AQ6ZMR3 332 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 SMAP1Q8IYB5 467 aaPredicted RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 NAA15Q9BXJ9 866 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 SRRTQ9BXP5 876 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 SEC63Q9UGP8 760 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 PUF60Q9UHX1 559 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 SPTLC2O15270 562 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 FOXO3O43524 673 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 RRAGBQ5VZM2 374 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 KANK3Q6NY19 840 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 CATIPQ7Z7H3 387 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 ANKRD18AQ8IVF6 992 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 TRIM47Q96LD4 638 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 FEZ1Q99689 392 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 RNF41Q9H4P4 317 aaPredicted RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 LZTFL1Q9NQ48 299 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 ZRANB1Q9UGI0 708 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 TRMT112Q9UI30 125 aaKnown RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 ADGRB3O60242 1522 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 PPP1R12BO60237 982 aaPredicted RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 GBP2P32456 591 aaPredicted RBP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 RBM5P52756 815 aaKnown RBP eCLIP6.45□□□□□ -1.38
ERCC6-213ENST00000624341 POLKQ9UBT6 870 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 PIK3C2BO00750 1634 aa6.45□□□□□ -1.38
ERCC6-213ENST00000624341 RTL1A6NKG5 1358 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 MACROD2A1Z1Q3 448 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 GTF2A1P52655 376 aaPredicted RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 ZNF445P59923 1031 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 CREB3L3Q68CJ9 461 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 SPTY2D1Q68D10 685 aaPredicted RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 C10orf67Q8IYJ2 551 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 VPS18Q9P253 973 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 GADD45BO75293 160 aaPredicted RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 FGFR1OPO95684 399 aaKnown RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 STX17P56962 302 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 CCDC40Q4G0X9 1142 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 MCMDC2Q4G0Z9 681 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 TCERG1LQ5VWI1 586 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 UTP14AQ9BVJ6 771 aaKnown RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 PRAG1Q86YV5 1406 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 TTC21BQ7Z4L5 1316 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 ZBTB43O43298 467 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 RHOXF2BP0C7M4 288 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 EZRP15311 586 aaKnown RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 APOBRQ0VD83 1088 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 MFSD6Q6ZSS7 791 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 CTNNBL1Q8WYA6 563 aaPredicted RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 GOLGA1Q92805 767 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 RHOXF2Q9BQY4 288 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 TCP11L1Q9NUJ3 509 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 LMBRD1Q9NUN5 540 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 ANKRD18BA2A2Z9 1011 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 IVLP07476 585 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 CAVIN4Q5BKX8 364 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 PAF1Q8N7H5 531 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 MED1Q15648 1581 aaPredicted RBP6.44□□□□□ -1.38
ERCC6-213ENST00000624341 A0A1B0GVL5 298 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 PIP4K2BP78356 416 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 UBE4AQ14139 1066 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 CCDC96Q2M329 555 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 SLC4A8Q2Y0W8 1093 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 ANKRD13DQ6ZTN6 518 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 MYRIPQ8NFW9 859 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 ATRIPQ8WXE1 791 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 VAT1LQ9HCJ6 419 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 TMEM63CQ9P1W3 806 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 ACEP12821 1306 aa6.44□□□□□ -1.38
ERCC6-213ENST00000624341 MPHOSPH10O00566 681 aaKnown RBP6.43□□□□□ -1.38
ERCC6-213ENST00000624341 HSF2BPO75031 334 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 SMC1AQ14683 1233 aaKnown RBP6.43□□□□□ -1.38
ERCC6-213ENST00000624341 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
ERCC6-213ENST00000624341 MICALL1Q8N3F8 863 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 RAB34Q9BZG1 259 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 LRRC7Q96NW7 1537 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 CTAGE9A4FU28 777 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 SLC5A1P13866 664 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 DNAJC21Q5F1R6 531 aaKnown RBP6.43□□□□□ -1.38
ERCC6-213ENST00000624341 RUFY3Q7L099 469 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 AMOTL2Q9Y2J4 779 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 PTPDC1A2A3K4 754 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 GRM8O00222 908 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 TMEM266Q2M3C6 531 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms