RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	FAM89A	Q96GI7	184 aa		13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	WNK4	Q96J92	1243 aa		13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	FZD1	Q9UP38	647 aa		13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	PTCH2	Q9Y6C5	1203 aa		13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	OTOF	Q9HC10	1997 aa		13.52	□□□□□ -0.25
RRP12-215	ENST00000622320	ZSWIM8	A7E2V4	1837 aa		13.51	□□□□□ -0.25
RRP12-215	ENST00000622320	ECM29	Q5VYK3	1845 aa		13.51	□□□□□ -0.25
RRP12-215	ENST00000622320	MNX1	P50219	401 aa	Predicted RBP	13.51	□□□□□ -0.25
RRP12-215	ENST00000622320	SP3	Q02447	781 aa		13.51	□□□□□ -0.25
RRP12-215	ENST00000622320	TSPYL4	Q9UJ04	414 aa		13.51	□□□□□ -0.25
RRP12-215	ENST00000622320	RANBP2	P49792	3224 aa	Known RBP	13.51	□□□□□ -0.25
RRP12-215	ENST00000622320	NEFM	P07197	916 aa		13.5	□□□□□ -0.25
RRP12-215	ENST00000622320	NBPF11	Q86T75	865 aa		13.5	□□□□□ -0.25
RRP12-215	ENST00000622320	OGFOD1	Q8N543	542 aa		13.5	□□□□□ -0.25
RRP12-215	ENST00000622320	SLC10A4	Q96EP9	437 aa		13.5	□□□□□ -0.25
RRP12-215	ENST00000622320	CLMN	Q96JQ2	1002 aa		13.5	□□□□□ -0.25
RRP12-215	ENST00000622320	SPEF2	Q9C093	1822 aa		13.5	□□□□□ -0.25
RRP12-215	ENST00000622320	XDH	P47989	1333 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	MYO3B	Q8WXR4	1341 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	MYC	P01106	439 aa	Predicted RBP	13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	RTL5	Q5HYW3	569 aa	Predicted RBP	13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	OTUD7B	Q6GQQ9	843 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	PODN	Q7Z5L7	613 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	MXD3	Q9BW11	206 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	PRO3102	Q9H379	93 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	SEC31B	Q9NQW1	1179 aa		13.49	□□□□□ -0.25
RRP12-215	ENST00000622320	MED23	Q9ULK4	1368 aa		13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	COL6A3	P12111	3177 aa		13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	IRS4	O14654	1257 aa	Predicted RBP	13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	NFE2L2	Q16236	605 aa		13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	MAP3K11	Q16584	847 aa		13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	DACT2	Q5SW24	774 aa		13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	ISCA1	Q9BUE6	129 aa		13.48	□□□□□ -0.25
RRP12-215	ENST00000622320	ATP5J2-PTCD1	G3V325	749 aa		13.47	□□□□□ -0.25
RRP12-215	ENST00000622320	FBXW7	Q969H0	707 aa		13.47	□□□□□ -0.25
RRP12-215	ENST00000622320	SHISA4	Q96DD7	197 aa		13.47	□□□□□ -0.25
RRP12-215	ENST00000622320	PPP2R1A	P30153	589 aa		13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	GJA5	P36382	358 aa		13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	DDX10	Q13206	875 aa	Known RBP	13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	ARHGEF6	Q15052	776 aa		13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	PLBD2	Q8NHP8	589 aa		13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	SH3TC2	Q8TF17	1288 aa		13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	DPF3	Q92784	378 aa		13.46	□□□□□ -0.25
RRP12-215	ENST00000622320	SOX1	O00570	391 aa	Predicted RBP	13.45	□□□□□ -0.26
RRP12-215	ENST00000622320	PPP1R12B	O60237	982 aa	Predicted RBP	13.45	□□□□□ -0.26
RRP12-215	ENST00000622320	ATP2B4	P23634	1241 aa		13.45	□□□□□ -0.26
RRP12-215	ENST00000622320	PTPN18	Q99952	460 aa		13.45	□□□□□ -0.26
RRP12-215	ENST00000622320	CHPF2	Q9P2E5	772 aa		13.45	□□□□□ -0.26
RRP12-215	ENST00000622320	STRIP1	Q5VSL9	837 aa		13.44	□□□□□ -0.26
RRP12-215	ENST00000622320	ZBED3	Q96IU2	234 aa	Predicted RBP	13.44	□□□□□ -0.26
RRP12-215	ENST00000622320	DEFB129	Q9H1M3	183 aa		13.44	□□□□□ -0.26
RRP12-215	ENST00000622320		A0A1W2PPC1	479 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	TESPA1	A2RU30	521 aa	Predicted RBP	13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	WTIP	A6NIX2	430 aa	Predicted RBP	13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	UNCX	A6NJT0	531 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	MMP14	P50281	582 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	TAF1C	Q15572	869 aa	Predicted RBP	13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	CCDC152	Q4G0S7	254 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	KIAA0825	Q8IV33	1275 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	LRCH3	Q96II8	777 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	PLEKHF1	Q96S99	279 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	HTATIP2	Q9BUP3	242 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	PPP2R3B	Q9Y5P8	575 aa		13.43	□□□□□ -0.26
RRP12-215	ENST00000622320	MAPK8IP3	Q9UPT6	1336 aa		13.42	□□□□□ -0.26
RRP12-215	ENST00000622320	ANKRD13D	Q6ZTN6	518 aa		13.42	□□□□□ -0.26
RRP12-215	ENST00000622320	ANKRD18A	Q8IVF6	992 aa		13.42	□□□□□ -0.26
RRP12-215	ENST00000622320	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.42	□□□□□ -0.26
RRP12-215	ENST00000622320	ZNF804B	A4D1E1	1349 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	HSP90B1	P14625	803 aa	Known RBP	13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	IREB2	P48200	963 aa	Known RBP	13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	RALBP1	Q15311	655 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	KRT24	Q2M2I5	525 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	ANKRD13A	Q8IZ07	590 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	OPTN	Q96CV9	577 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	COA1	Q9GZY4	146 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	ZFYVE28	Q9HCC9	887 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320	LAMA3	Q16787	3333 aa		13.41	□□□□□ -0.26
RRP12-215	ENST00000622320		A0A0C4DFX4	3053 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	ZBTB7B	O15156	539 aa	Predicted RBP	13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	TRIM28	Q13263	835 aa	Known RBP	13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	MTFR1	Q15390	333 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	UBE2Q1	Q7Z7E8	422 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	BRI3BP	Q8WY22	251 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	ARHGAP39	Q9C0H5	1083 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	BABAM1	Q9NWV8	329 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	NR2E3	Q9Y5X4	410 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	MYH3	P11055	1940 aa		13.4	□□□□□ -0.26
RRP12-215	ENST00000622320	CCL15-CCL14	A0A0B4J2E2	113 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	DLGAP5	Q15398	846 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	CCL15	Q16663	113 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	SUPT20HL1	Q3ZLR7	823 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	HDGFL1	Q5TGJ6	251 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	NKX2-3	Q8TAU0	364 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	MS4A4A	Q96JQ5	239 aa		13.39	□□□□□ -0.27
RRP12-215	ENST00000622320	ELP3	Q9H9T3	547 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms