RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RABGGTAQ92696 567 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 CLSTN2Q9H4D0 955 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 EBAG9O00559 213 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 SF3A1Q15459 793 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 ACRBPQ8NEB7 543 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 GOLGA1Q92805 767 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 ARHGEF1Q92888 912 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 SUGT1Q9Y2Z0 365 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 ZC3H13Q5T200 1668 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 MAP2K7O14733 419 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 INPP5BP32019 993 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 PPP2R3AQ06190 1150 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 IRF5Q13568 498 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 ISM2Q6H9L7 571 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 KCNV1Q6PIU1 500 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 PAIP2Q9BPZ3 127 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 CPSF2Q9P2I0 782 aaKnown RBP9.12□□□□□ -0.95
VPS11-209ENST00000622309 ODF2LQ9ULJ1 636 aa9.12□□□□□ -0.95
VPS11-209ENST00000622309 IPO7O95373 1038 aaKnown RBP9.11□□□□□ -0.95
VPS11-209ENST00000622309 PAX3P23760 479 aa9.11□□□□□ -0.95
VPS11-209ENST00000622309 DHX8Q14562 1220 aaKnown RBP9.11□□□□□ -0.95
VPS11-209ENST00000622309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS11-209ENST00000622309 IMPACTQ9P2X3 320 aa9.11□□□□□ -0.95
VPS11-209ENST00000622309 IFT172Q9UG01 1749 aa9.11□□□□□ -0.95
VPS11-209ENST00000622309 TMPOP42166 694 aaKnown RBP9.11□□□□□ -0.95
VPS11-209ENST00000622309 FAM71BQ8TC56 605 aa9.11□□□□□ -0.95
VPS11-209ENST00000622309 EID1Q9Y6B2 187 aa9.11□□□□□ -0.95
VPS11-209ENST00000622309 NRXN1Q9ULB1 1477 aa9.11□□□□□ -0.95
VPS11-209ENST00000622309 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 EXOC5O00471 708 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 LMNB1P20700 586 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 GPTP24298 496 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 TXLNAP40222 546 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 FAM210AQ96ND0 272 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 IRAK4Q9NWZ3 460 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 MTMR6Q9Y217 621 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 FAM169AQ9Y6X4 670 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 PPLO60437 1756 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 IL16Q14005 1332 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 A0A1B0GUA9 196 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 ELL2O00472 640 aaPredicted RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 N4BP1O75113 896 aaKnown RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 GNAI3P08754 354 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 GJB2P29033 226 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 CRYMQ14894 314 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 ARHGAP45Q92619 1136 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 LARP6Q9BRS8 491 aaKnown RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 FAM204AQ9H8W3 233 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 SPATS2LQ9NUQ6 558 aaKnown RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 ETAA1Q9NY74 926 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 KIAA1210Q9ULL0 1709 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 ADGRB1O14514 1584 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 CHUKO15111 745 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 CTAGE5O15320 804 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 IQCB1Q15051 598 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 TMC6Q7Z403 805 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 SPATA32Q96LK8 384 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 SH3GL3Q99963 347 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 OSBPL5Q9H0X9 879 aaPredicted RBP9.1□□□□□ -0.95
VPS11-209ENST00000622309 MCM8Q9UJA3 840 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 QRICH2Q9H0J4 1663 aa9.1□□□□□ -0.95
VPS11-209ENST00000622309 IBSPP21815 317 aaPredicted RBP9.09□□□□□ -0.95
VPS11-209ENST00000622309 KCNJ6P48051 423 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 NAP1L1P55209 391 aaKnown RBP9.09□□□□□ -0.95
VPS11-209ENST00000622309 STX1AQ16623 288 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 ANKRD18AQ8IVF6 992 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 AFAP1L1Q8TED9 768 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 RILPL2Q969X0 211 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 MTA3Q9BTC8 594 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
VPS11-209ENST00000622309 NPHP3Q7Z494 1330 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 SLIT1O75093 1534 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 MYO5BQ9ULV0 1848 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 CCT5P48643 541 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 GNAI1P63096 354 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 CCDC181Q5TID7 509 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 VPS53Q5VIR6 699 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 ARMC2Q8NEN0 867 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 MPHOSPH8Q99549 860 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 CAPN7Q9Y6W3 813 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 TTC21BQ7Z4L5 1316 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 ARHGAP23Q9P227 1491 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 NEXMIFQ5QGS0 1516 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 TMCO5BA8MYB1 307 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 MECOMQ03112 1051 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 ADCY2Q08462 1091 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 RBM43Q6ZSC3 357 aaKnown RBP9.09□□□□□ -0.95
VPS11-209ENST00000622309 FERMT3Q86UX7 667 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 TXNDC2Q86VQ3 553 aa9.09□□□□□ -0.95
VPS11-209ENST00000622309 CCDC83Q8IWF9 413 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms