RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 NDUFA8P51970 172 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 MRFAP1L1Q96HT8 127 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 EPC1Q9H2F5 836 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 IFT172Q9UG01 1749 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 TERF2Q15554 542 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 ANKLE2Q86XL3 938 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 TMEM2Q9UHN6 1383 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 SIGLEC1Q9BZZ2 1709 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 USP6P35125 1406 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 SPECC1Q5M775 1068 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 PCDHA7Q9UN72 937 aa13.2□□□□□ -0.3
PCDHGA11-203ENST00000622044 SYKP43405 635 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 MCM6Q14566 821 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 HMGB1P09429 215 aaKnown RBP13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 CASQ1P31415 396 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 TNNI3KQ59H18 835 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 TTC39AQ5SRH9 613 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 FPGT-TNNI3KV9GXZ4 949 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 ARHGAP31Q2M1Z3 1444 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 RICTORQ6R327 1708 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 EVCP57679 992 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 PHF8Q9UPP1 1060 aa13.19□□□□□ -0.3
PCDHGA11-203ENST00000622044 IMMTQ16891 758 aaKnown RBP13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 PPP1R13BQ96KQ4 1090 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 CLIC4Q9Y696 253 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 CCP110O43303 1012 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 ATP1A3P13637 1013 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 FANCCQ00597 558 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 NSUN7Q8NE18 718 aaKnown RBP13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDHGA11-203ENST00000622044 PHACTR2O75167 634 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 GIGYF1O75420 1035 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 ZNF202O95125 648 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 GOLGA6L1Q8N7Z2 621 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 NFATC2IPQ8NCF5 419 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 CBFA2T2O43439 604 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 CLCN6P51797 869 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 IQCB1Q15051 598 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 ZNF594Q96JF6 807 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
PCDHGA11-203ENST00000622044 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 ZSCAN12O43309 604 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 CEP126Q9P2H0 1117 aa13.16□□□□□ -0.3
PCDHGA11-203ENST00000622044 PRC1O43663 620 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 GYS2P54840 703 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 C10orf67Q8IYJ2 551 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 DESI2Q9BSY9 194 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 A0A0G2JLW4 131 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 E7EWF7 191 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 LRRN4CLQ8ND94 238 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 AK7Q96M32 723 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 CCZ1BP86790 482 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 PNOCQ13519 176 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 GCKRQ14397 625 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 SAFBQ15424 915 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 KRBA2Q6ZNG9 492 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 ARFGAP3Q9NP61 516 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 ADCY9O60503 1353 aa13.15□□□□□ -0.3
PCDHGA11-203ENST00000622044 SLFN14P0C7P3 912 aa13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 AMOTQ4VCS5 1084 aa13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 DHX40Q8IX18 779 aaKnown RBP13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 NUP133Q8WUM0 1156 aa13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 ZNF213O14771 459 aa13.14□□□□□ -0.31
PCDHGA11-203ENST00000622044 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms