RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ATP5DP30049 168 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
CLTC-215ENST00000621829 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 LRRD1A4D1F6 860 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 TNIP1Q15025 636 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 LRRC23Q53EV4 343 aaPredicted RBP13.1□□□□□ -0.31
CLTC-215ENST00000621829 LRRC2Q9BYS8 371 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 ODF2LQ9ULJ1 636 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 AKAP2Q9Y2D5 859 aa13.1□□□□□ -0.31
CLTC-215ENST00000621829 RPGRIP1LQ68CZ1 1315 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 GMNNO75496 209 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 C8orf74Q6P047 294 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 KCNG4Q8TDN1 519 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 N4BP2L2Q92802 583 aaPredicted RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 PRPHP41219 470 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 ZGPATQ8N5A5 531 aaKnown RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.311e-8■■□□□ 11.5
CLTC-215ENST00000621829 HAND2P61296 217 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 RAD54L2Q9Y4B4 1467 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 AKR1B15C9JRZ8 316 aaPredicted RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 TTC19Q6DKK2 380 aaPredicted RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 BICD1Q96G01 975 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
CLTC-215ENST00000621829 SYNCQ9H7C4 482 aa13.09□□□□□ -0.31
CLTC-215ENST00000621829 PABPN1LA6NDY0 278 aaKnown RBP13.08□□□□□ -0.31
CLTC-215ENST00000621829 RASEFQ8IZ41 740 aa13.08□□□□□ -0.31
CLTC-215ENST00000621829 NEK1Q96PY6 1258 aa13.08□□□□□ -0.31
CLTC-215ENST00000621829 MKNK2Q9HBH9 465 aa13.08□□□□□ -0.31
CLTC-215ENST00000621829 STRN4Q9NRL3 753 aa13.08□□□□□ -0.31
CLTC-215ENST00000621829 SSX2IPQ9Y2D8 614 aa13.08□□□□□ -0.31
CLTC-215ENST00000621829 UTP11Q9Y3A2 253 aaKnown RBP13.08□□□□□ -0.31
CLTC-215ENST00000621829 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 TMPOP42166 694 aaKnown RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 SLC8A1P32418 973 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 PLEKHA4Q9H4M7 779 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 STMN1P16949 149 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 TTF1Q15361 905 aaPredicted RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 PLEKHH2Q8IVE3 1493 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 A6NNZ2 444 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 BAG2O95816 211 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 IFIT1P09914 478 aaKnown RBP13.08□□□□□ -0.32
CLTC-215ENST00000621829 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 E2F5Q15329 346 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 TMEM67Q5HYA8 995 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 CATIPQ7Z7H3 387 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 CCDC26Q8TAB7 109 aa13.08□□□□□ -0.32
CLTC-215ENST00000621829 SPECC1L-ADORA2AF8WAN1 911 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 GNGT1P63211 74 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 TXNDC16Q9P2K2 825 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 NLRP6P59044 892 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 DNAI2Q9GZS0 605 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 ATP1A2P50993 1020 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 IFT20Q8IY31 132 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
CLTC-215ENST00000621829 LUC7L3O95232 432 aaKnown RBP13.07□□□□□ -0.32
CLTC-215ENST00000621829 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
CLTC-215ENST00000621829 PLEKHO1Q53GL0 409 aaPredicted RBP13.07□□□□□ -0.32
CLTC-215ENST00000621829 PPP4R3AQ6IN85 833 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 SNX21Q969T3 373 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 DHX58Q96C10 678 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 BTBD11A6QL63 1104 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 MX2P20592 715 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 TRIM27P14373 513 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 ATICP31939 592 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 FRMD4BQ9Y2L6 1034 aa13.07□□□□□ -0.32
CLTC-215ENST00000621829 F6X3S4 739 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 HIP1RO75146 1068 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 LONRF3Q496Y0 759 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 DACT3Q96B18 629 aaPredicted RBP13.06□□□□□ -0.32
CLTC-215ENST00000621829 CALCOCO2Q13137 446 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 ARHGAP24Q8N264 748 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 PSMB7Q99436 277 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 WIZO95785 1651 aa13.06□□□□□ -0.32
CLTC-215ENST00000621829 METTL24Q5JXM2 366 aa13.05□□□□□ -0.32
CLTC-215ENST00000621829 TAOK1Q7L7X3 1001 aa13.05□□□□□ -0.32
CLTC-215ENST00000621829 IQCA1Q86XH1 822 aa13.05□□□□□ -0.32
CLTC-215ENST00000621829 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
CLTC-215ENST00000621829 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
CLTC-215ENST00000621829 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms