RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 CTDNEP1O95476 244 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
GDNF-208ENST00000620847 SLFNL1Q499Z3 407 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 IFFO2Q5TF58 517 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 TTLL7Q6ZT98 887 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 NSUN7Q8NE18 718 aaKnown RBP9.52□□□□□ -0.89
GDNF-208ENST00000620847 DDX11Q96FC9 970 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 NEUROD6Q96NK8 337 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 CFAP45Q9UL16 551 aa9.52□□□□□ -0.89
GDNF-208ENST00000620847 TIMM10P62072 90 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
GDNF-208ENST00000620847 PYCARDQ9ULZ3 195 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 NWD2Q9ULI1 1742 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 CTIFO43310 598 aaKnown RBP9.51□□□□□ -0.89
GDNF-208ENST00000620847 SPC24Q8NBT2 197 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 BICD2Q8TD16 824 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 ATG3Q9NT62 314 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 SPATA31A3Q5VYP0 1347 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 EYA2O00167 538 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 CIAO1O76071 339 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 HSPD1P10809 573 aaKnown RBP9.51□□□□□ -0.89
GDNF-208ENST00000620847 TDRD7Q8NHU6 1098 aaKnown RBP9.51□□□□□ -0.89
GDNF-208ENST00000620847 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
GDNF-208ENST00000620847 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
GDNF-208ENST00000620847 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
GDNF-208ENST00000620847 DDX60Q8IY21 1712 aaKnown RBP9.5□□□□□ -0.89
GDNF-208ENST00000620847 E7EWF7 191 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 APOBRQ0VD83 1088 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 LRRC24Q50LG9 513 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 PLA2G4DQ86XP0 818 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 CCDC191Q8NCU4 936 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.5□□□□□ -0.89
GDNF-208ENST00000620847 MAST3O60307 1309 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 PCDH11XQ9BZA7 1347 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 PCDH11YQ9BZA8 1340 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 RCOR1Q9UKL0 485 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 A0A0G2JLW4 131 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 PTPDC1A2A3K4 754 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 ERVV-2B6SEH9 535 aa9.5□□□□□ -0.89
GDNF-208ENST00000620847 RNF113AO15541 343 aaKnown RBP9.5□□□□□ -0.89
GDNF-208ENST00000620847 GABPB1Q06547 395 aaPredicted RBP9.5□□□□□ -0.89
GDNF-208ENST00000620847 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 IGSF3O75054 1194 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 CAVIN2O95810 425 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 A1BGP04217 495 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 IFIT1P09914 478 aaKnown RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 SYCP1Q15431 976 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 FBXL16Q8N461 479 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 ZNF165P49910 485 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 ZNF75DP51815 510 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 ZNF274Q96GC6 653 aaPredicted RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 TNS2Q63HR2 1409 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 MYH7P12883 1935 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 PTGS1P23219 599 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 PDIA3P30101 505 aaKnown RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 ATL3Q6DD88 541 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 ZCRB1Q8TBF4 217 aaKnown RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
GDNF-208ENST00000620847 CGNQ9P2M7 1197 aaKnown RBP9.49□□□□□ -0.89
GDNF-208ENST00000620847 WDR17Q8IZU2 1322 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 M0R2C6 588 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 EVCP57679 992 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 CADPS2Q86UW7 1296 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 ZBTB3Q9H5J0 574 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 CCT2P78371 535 aaKnown RBP9.48□□□□□ -0.89
GDNF-208ENST00000620847 DRC7Q8IY82 874 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 PUS3Q9BZE2 481 aaKnown RBP9.48□□□□□ -0.89
GDNF-208ENST00000620847 SMTNL1A8MU46 457 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 CEBPZQ03701 1054 aaKnown RBP9.48□□□□□ -0.89
GDNF-208ENST00000620847 SNW1Q13573 536 aaKnown RBP9.48□□□□□ -0.89
GDNF-208ENST00000620847 CCDC186Q7Z3E2 898 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 ILDR1Q86SU0 546 aaPredicted RBP9.48□□□□□ -0.89
GDNF-208ENST00000620847 FTOQ9C0B1 505 aaKnown RBP eCLIP9.48□□□□□ -0.89
GDNF-208ENST00000620847 GOLPH3LQ9H4A5 285 aa9.48□□□□□ -0.89
GDNF-208ENST00000620847 NCOA5Q9HCD5 579 aaKnown RBP9.48□□□□□ -0.89
GDNF-208ENST00000620847 XIRP1Q702N8 1843 aaKnown RBP9.47□□□□□ -0.89
GDNF-208ENST00000620847 CTAGE5O15320 804 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
GDNF-208ENST00000620847 IQCB1Q15051 598 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 CCAR1Q8IX12 1150 aaKnown RBP9.47□□□□□ -0.89
GDNF-208ENST00000620847 OSBP2Q969R2 916 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 USP28Q96RU2 1077 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 ISCA1Q9BUE6 129 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 TRIM5Q9C035 493 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 CARMIL3Q8ND23 1372 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 FOXP2O15409 715 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 CDC25BP30305 580 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 TTLL5Q6EMB2 1281 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 ENGASEQ8NFI3 743 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 ZNF396Q96N95 335 aaPredicted RBP9.47□□□□□ -0.89
GDNF-208ENST00000620847 NRBP1Q9UHY1 535 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 PAXBP1Q9Y5B6 917 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
GDNF-208ENST00000620847 FDPSP14324 419 aaKnown RBP9.46□□□□□ -0.89
GDNF-208ENST00000620847 CHST3Q7LGC8 479 aa9.46□□□□□ -0.89
GDNF-208ENST00000620847 CCDC112Q8NEF3 446 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms