RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
TP53-226ENST00000620739 CPA1P15085 419 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
TP53-226ENST00000620739 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 KIAA1211Q6ZU35 1233 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
TP53-226ENST00000620739 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 HSPA4P34932 840 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 KRT27Q7Z3Y8 459 aa13.62□□□□□ -0.23
TP53-226ENST00000620739 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
TP53-226ENST00000620739 PARP10Q53GL7 1025 aa13.61□□□□□ -0.23
TP53-226ENST00000620739 ZNF526Q8TF50 670 aaPredicted RBP13.61□□□□□ -0.23
TP53-226ENST00000620739 RAD50Q92878 1312 aa13.61□□□□□ -0.23
TP53-226ENST00000620739 IFIT1P09914 478 aaKnown RBP13.61□□□□□ -0.23
TP53-226ENST00000620739 ZSCAN20P17040 1043 aaPredicted RBP13.61□□□□□ -0.23
TP53-226ENST00000620739 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
TP53-226ENST00000620739 ZNF652Q9Y2D9 606 aa13.61□□□□□ -0.23
TP53-226ENST00000620739 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
TP53-226ENST00000620739 BTAF1O14981 1849 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 ATP2B3Q16720 1220 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
TP53-226ENST00000620739 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 SNX14Q9Y5W7 946 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 ZNF609O15014 1411 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 ZPR1O75312 459 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 ADCK5Q3MIX3 580 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 VGLL2Q8N8G2 317 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 RUFY2Q8WXA3 655 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 NARFQ9UHQ1 456 aa13.6□□□□□ -0.23
TP53-226ENST00000620739 RIC1Q4ADV7 1423 aa13.59□□□□□ -0.23
TP53-226ENST00000620739 DTNBO60941 627 aa13.59□□□□□ -0.23
TP53-226ENST00000620739 PDE8BO95263 885 aa13.59□□□□□ -0.23
TP53-226ENST00000620739 RC3H1Q5TC82 1133 aaKnown RBP13.59□□□□□ -0.23
TP53-226ENST00000620739 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
TP53-226ENST00000620739 MPHOSPH8Q99549 860 aa13.59□□□□□ -0.23
TP53-226ENST00000620739 ZAP70P43403 619 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 TTC39AQ5SRH9 613 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 TAF3Q5VWG9 929 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 SLC51AQ86UW1 340 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 AKAP2Q9Y2D5 859 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 RFC4P35249 363 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 ZGPATQ8N5A5 531 aaKnown RBP13.58□□□□□ -0.24
TP53-226ENST00000620739 RNF25Q96BH1 459 aaPredicted RBP13.58□□□□□ -0.24
TP53-226ENST00000620739 SETDB2Q96T68 719 aa13.58□□□□□ -0.24
TP53-226ENST00000620739 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
TP53-226ENST00000620739 CCDC171Q6TFL3 1326 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 COL4A1P02462 1669 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
TP53-226ENST00000620739 ST18O60284 1047 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 EGFL6Q8IUX8 553 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 AK7Q96M32 723 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 COL5A3P25940 1745 aaPredicted RBP13.57□□□□□ -0.24
TP53-226ENST00000620739 ABCC12Q96J65 1359 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 MCAMP43121 646 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 PHKA1P46020 1223 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 KCNJ4P48050 445 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 VPS53Q5VIR6 699 aa13.57□□□□□ -0.24
TP53-226ENST00000620739 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
TP53-226ENST00000620739 AK9Q5TCS8 1911 aa13.56□□□□□ -0.24
TP53-226ENST00000620739 DDIT3P35638 169 aa13.56□□□□□ -0.24
TP53-226ENST00000620739 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
TP53-226ENST00000620739 ANKRD36CQ5JPF3 1778 aa13.56□□□□□ -0.24
TP53-226ENST00000620739 RREB1Q92766 1687 aa13.56□□□□□ -0.24
TP53-226ENST00000620739 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
TP53-226ENST00000620739 CELF1Q92879 486 aaKnown RBP13.56□□□□□ -0.24
TP53-226ENST00000620739 HIP1O00291 1037 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 ANAPC15P60006 121 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 PKP1Q13835 747 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 A0A0G2JLW4 131 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 LETM1O95202 739 aaPredicted RBP13.55□□□□□ -0.24
TP53-226ENST00000620739 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
TP53-226ENST00000620739 TMX3Q96JJ7 454 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 IQSEC3Q9UPP2 1182 aaPredicted RBP13.55□□□□□ -0.24
TP53-226ENST00000620739 NHSQ6T4R5 1651 aa13.55□□□□□ -0.24
TP53-226ENST00000620739 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 CHRNDQ07001 517 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 NFIXQ14938 502 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
TP53-226ENST00000620739 CHMP5Q9NZZ3 219 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 SH3BP1Q9Y3L3 701 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 NPHP1O15259 732 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 FGFR2P21802 821 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
TP53-226ENST00000620739 BCAMP50895 628 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 OSBP2Q969R2 916 aa13.54□□□□□ -0.24
TP53-226ENST00000620739 SLC27A2O14975 620 aa13.53□□□□□ -0.24
TP53-226ENST00000620739 CYP2E1P05181 493 aaPredicted RBP13.53□□□□□ -0.24
TP53-226ENST00000620739 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms