RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 DENND2AQ9ULE3 1009 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 YTHDC2Q9H6S0 1430 aaKnown RBP5.24□□□□□ -1.57
CHL1-216ENST00000620033 ATP2B4P23634 1241 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 GTF2IP78347 998 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 TTC30BQ8N4P2 665 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 NFATC2IPQ8NCF5 419 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 TSNARE1Q96NA8 513 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 NPR1P16066 1061 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 IGBP1P78318 339 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 CAGE1Q8TC20 777 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 TTF2Q9UNY4 1162 aaKnown RBP5.24□□□□□ -1.57
CHL1-216ENST00000620033 SLC4A4Q9Y6R1 1079 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 HFM1A2PYH4 1435 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 HARSP12081 509 aaKnown RBP5.24□□□□□ -1.57
CHL1-216ENST00000620033 SYNE4Q8N205 404 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 NLRP7Q8WX94 980 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 RRP36Q96EU6 259 aaKnown RBP5.24□□□□□ -1.57
CHL1-216ENST00000620033 CALML4Q96GE6 196 aa5.24□□□□□ -1.57
CHL1-216ENST00000620033 CACYBPQ9HB71 228 aaKnown RBP5.24□□□□□ -1.57
CHL1-216ENST00000620033 DBF4Q9UBU7 674 aaPredicted RBP5.24□□□□□ -1.57
CHL1-216ENST00000620033 URB2Q14146 1524 aaKnown RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 GADD45BO75293 160 aaPredicted RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 GAS8O95995 478 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 STRN3Q13033 797 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 PARD3BQ8TEW8 1205 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 MASTLQ96GX5 879 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 ZNF396Q96N95 335 aaPredicted RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 MMRN2Q9H8L6 949 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 LUC7LQ9NQ29 371 aaKnown RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 USP40Q9NVE5 1235 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 CCDC196A0A1B0GTZ2 297 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 SYCE3A1L190 88 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 BIRC3Q13489 604 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 NAA30Q147X3 362 aaPredicted RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 JARID2Q92833 1246 aaPredicted RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 MCM9Q9NXL9 1143 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 PBRM1Q86U86 1689 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 APAF1O14727 1248 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 ZNF213O14771 459 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 ZNF18P17022 549 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 CTCFP49711 727 aaPredicted RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 BCAMP50895 628 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 SSRP1Q08945 709 aaKnown RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 STK3Q13188 491 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 NSMFQ6X4W1 530 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 HEATR3Q7Z4Q2 680 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 MCF2L2Q86YR7 1114 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 NSMCE1Q8WV22 266 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 IGSF1Q8N6C5 1336 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 GNAT1P11488 350 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 AKNAD1Q5T1N1 836 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 MFSD6Q6ZSS7 791 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 RIOK1Q9BRS2 568 aaKnown RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 TCP11L1Q9NUJ3 509 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 DKC1O60832 514 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHL1-216ENST00000620033 CDR1P51861 262 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 YARSP54577 528 aaKnown RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 IFRD2Q12894 506 aaPredicted RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 SMARCE1Q969G3 411 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 CASKIN1Q8WXD9 1431 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 DHX29Q7Z478 1369 aaKnown RBP5.23□□□□□ -1.57
CHL1-216ENST00000620033 PRXQ9BXM0 1461 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 GOLGA6BA6NDN3 693 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 ERLIN2O94905 339 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 DUSP27Q5VZP5 1158 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 NLRX1Q86UT6 975 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 SESTD1Q86VW0 696 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 KIAA0825Q8IV33 1275 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 IFT74Q96LB3 600 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 GOLGA6AQ9NYA3 693 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 NOS1P29475 1434 aa5.23□□□□□ -1.57
CHL1-216ENST00000620033 UNC13AQ9UPW8 1703 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 USP8P40818 1118 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 KRT33BQ14525 404 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 GNPTABQ3T906 1256 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 JAKMIP3Q5VZ66 844 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 ANKRD13DQ6ZTN6 518 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 METTL23Q86XA0 190 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 CCDC83Q8IWF9 413 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 DOLKQ9UPQ8 538 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 ATP11BQ9Y2G3 1177 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 DENND3A2RUS2 1198 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 IFIT3O14879 490 aaKnown RBP5.22□□□□□ -1.57
CHL1-216ENST00000620033 TMOD1P28289 359 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 SNX16P57768 344 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 IFIT1BQ5T764 474 aaKnown RBP5.22□□□□□ -1.57
CHL1-216ENST00000620033 KANK3Q6NY19 840 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 TXLNBQ8N3L3 684 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 BSDC1Q9NW68 430 aaPredicted RBP5.22□□□□□ -1.57
CHL1-216ENST00000620033 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.22□□□□□ -1.57
CHL1-216ENST00000620033 IPO11Q9UI26 975 aaKnown RBP5.22□□□□□ -1.57
CHL1-216ENST00000620033 TRIM17Q9Y577 477 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 KIAA0556O60303 1618 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 SCNN1DP51172 638 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 NONOQ15233 471 aaKnown RBP eCLIP5.22□□□□□ -1.57
CHL1-216ENST00000620033 USPL1Q5W0Q7 1092 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 CC2D2BQ6DHV5 1058 aa5.22□□□□□ -1.57
CHL1-216ENST00000620033 WDR66Q8TBY9 1149 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms