RNA–Protein interactions for RNA: ENST00000619922.1

PRAMEF11-201, Transcript of PRAME family member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF11, Length 1,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11-201ENST00000619922 RTL9Q8NET4 1388 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 PDE8BO95263 885 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 MCM2P49736 904 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 C1QTNF8P60827 252 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 RAB3GAP1Q15042 981 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 VGLL2Q8N8G2 317 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 SEC31BQ9NQW1 1179 aa13.74□□□□□ -0.21
PRAMEF11-201ENST00000619922 CEP350Q5VT06 3117 aa13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 KCNJ4P48050 445 aa13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 TICAM2Q86XR7 235 aa13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 NLGN2Q8NFZ4 835 aa13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 GRPEL1Q9HAV7 217 aa13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 ABCC12Q96J65 1359 aa13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
PRAMEF11-201ENST00000619922 FKBP4Q02790 459 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 TRAPPC3LQ5T215 181 aa13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 PRPF40BQ6NWY9 871 aaKnown RBP13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 MAP4K1Q92918 833 aa13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 RBM8AQ9Y5S9 174 aaKnown RBP13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 LAMB2P55268 1798 aa13.72□□□□□ -0.21
PRAMEF11-201ENST00000619922 PHF14O94880 888 aa13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 RFC4P35249 363 aa13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 PUM3Q15397 648 aaKnown RBP13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 ZNF589Q86UQ0 364 aaPredicted RBP13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 UPF3BQ9BZI7 483 aaKnown RBP13.71□□□□□ -0.21
PRAMEF11-201ENST00000619922 HMGB2P26583 209 aaKnown RBP13.71□□□□□ -0.22
PRAMEF11-201ENST00000619922 NECTIN1Q15223 517 aa13.71□□□□□ -0.22
PRAMEF11-201ENST00000619922 AMIGO3Q86WK7 504 aa13.71□□□□□ -0.22
PRAMEF11-201ENST00000619922 LPIN2Q92539 896 aa13.71□□□□□ -0.22
PRAMEF11-201ENST00000619922 KCNB2Q92953 911 aa13.71□□□□□ -0.22
PRAMEF11-201ENST00000619922 CDC5LQ99459 802 aaKnown RBP13.71□□□□□ -0.22
PRAMEF11-201ENST00000619922 CHGBP05060 677 aa13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 SLC5A1P13866 664 aa13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 ZKSCAN1P17029 563 aaPredicted RBP13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 SF3B3Q15393 1217 aaKnown RBP13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 LRRFIP1Q32MZ4 808 aaKnown RBP13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 SLC10A5Q5PT55 438 aa13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 HELLSQ9NRZ9 838 aa13.7□□□□□ -0.22
PRAMEF11-201ENST00000619922 TAF5LO75529 589 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 FGFR2P21802 821 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 ZAP70P43403 619 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 SCARF1Q14162 830 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 SEC62Q99442 399 aaKnown RBP13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 SPEF2Q9C093 1822 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 GOLGA6L22H0YM25 854 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 SLC27A2O14975 620 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 RNF113AO15541 343 aaKnown RBP13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 YBX3P16989 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 ADRA2BP18089 450 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 SSFA2P28290 1259 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 ZMYM1Q5SVZ6 1142 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 RNF20Q5VTR2 975 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 TMX3Q96JJ7 454 aa13.69□□□□□ -0.22
PRAMEF11-201ENST00000619922 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 UQCRFS1P1P0C7P4 283 aa13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 CCDC102BQ68D86 513 aa13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 TPTE2Q6XPS3 522 aa13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 NOL8Q76FK4 1167 aaKnown RBP13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 FLAD1Q8NFF5 587 aa13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 TNPO1Q92973 898 aaKnown RBP13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 JAKMIP1Q96N16 626 aaKnown RBP13.68□□□□□ -0.22
PRAMEF11-201ENST00000619922 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 MCAMP43121 646 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 TM6SF1Q9BZW5 370 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 ESPNB1AK53 854 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 NPHP1O15259 732 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 ARID4AP29374 1257 aaPredicted RBP13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 PHKA1P46020 1223 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 CHRNDQ07001 517 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 SLFNL1Q499Z3 407 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 GLIPR1L2Q4G1C9 344 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 TTC14Q96N46 770 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 HMG20BQ9P0W2 317 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
PRAMEF11-201ENST00000619922 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
PRAMEF11-201ENST00000619922 PSMA5P28066 241 aa13.66□□□□□ -0.22
PRAMEF11-201ENST00000619922 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms