RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 C2orf69Q8N8R5 385 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 MXD3Q9BW11 206 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 PLA2G12BQ9BX93 195 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 CACNA1FO60840 1977 aa14.27□□□□□ -0.13
TARDBP-221ENST00000619555 MED23Q9ULK4 1368 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 USP17L8P0C7I0 530 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 BRPF1P55201 1214 aaPredicted RBP14.26□□□□□ -0.13
TARDBP-221ENST00000619555 FAM161AQ3B820 660 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
TARDBP-221ENST00000619555 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
TARDBP-221ENST00000619555 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 WDR63Q8IWG1 891 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 CDCA5Q96FF9 252 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 ABHD8Q96I13 439 aa14.26□□□□□ -0.13
TARDBP-221ENST00000619555 ZNF609O15014 1411 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 FAM155AB1AL88 458 aaPredicted RBP14.25□□□□□ -0.13
TARDBP-221ENST00000619555 CSF1RP07333 972 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 ITGA6P23229 1130 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
TARDBP-221ENST00000619555 NOGQ13253 232 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 LINS1Q8NG48 757 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 MYH16Q9H6N6 1097 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 MYOZ2Q9NPC6 264 aa14.25□□□□□ -0.13
TARDBP-221ENST00000619555 SPINK5Q9NQ38 1064 aaPredicted RBP14.25□□□□□ -0.13
TARDBP-221ENST00000619555 SCAF8Q9UPN6 1271 aaKnown RBP14.25□□□□□ -0.13
TARDBP-221ENST00000619555 F6X3S4 739 aa14.24□□□□□ -0.13
TARDBP-221ENST00000619555 CA12O43570 354 aa14.24□□□□□ -0.13
TARDBP-221ENST00000619555 KLRK1P26718 216 aa14.24□□□□□ -0.13
TARDBP-221ENST00000619555 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
TARDBP-221ENST00000619555 DACT2Q5SW24 774 aa14.24□□□□□ -0.13
TARDBP-221ENST00000619555 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
TARDBP-221ENST00000619555 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
TARDBP-221ENST00000619555 ZNF804BA4D1E1 1349 aa14.23□□□□□ -0.13
TARDBP-221ENST00000619555 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
TARDBP-221ENST00000619555 NBPF9Q3BBW0 867 aa14.23□□□□□ -0.13
TARDBP-221ENST00000619555 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
TARDBP-221ENST00000619555 ANKRD2Q9GZV1 360 aa14.23□□□□□ -0.13
TARDBP-221ENST00000619555 COA1Q9GZY4 146 aa14.23□□□□□ -0.13
TARDBP-221ENST00000619555 STRIP1Q5VSL9 837 aa14.22□□□□□ -0.13
TARDBP-221ENST00000619555 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
TARDBP-221ENST00000619555 MIER1Q8N108 512 aa14.22□□□□□ -0.13
TARDBP-221ENST00000619555 CCDC102AQ96A19 550 aa14.22□□□□□ -0.13
TARDBP-221ENST00000619555 ZNF646O15015 1829 aaPredicted RBP14.21□□□□□ -0.13
TARDBP-221ENST00000619555 ANKRD18BA2A2Z9 1011 aa14.21□□□□□ -0.13
TARDBP-221ENST00000619555 SNAP23O00161 211 aa14.21□□□□□ -0.13
TARDBP-221ENST00000619555 FOXO4P98177 505 aa14.21□□□□□ -0.13
TARDBP-221ENST00000619555 CHRNDQ07001 517 aa14.21□□□□□ -0.13
TARDBP-221ENST00000619555 BEND3Q5T5X7 828 aa14.21□□□□□ -0.13
TARDBP-221ENST00000619555 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
TARDBP-221ENST00000619555 PITPNM2Q9BZ72 1349 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 CCDC85CA6NKD9 419 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 TAF5LO75529 589 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 SLC10A3P09131 477 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 KCNJ4P48050 445 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 TTLL5Q6EMB2 1281 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 MOB2Q70IA6 237 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 HELBQ8NG08 1087 aaPredicted RBP14.2□□□□□ -0.14
TARDBP-221ENST00000619555 CHMP3Q9Y3E7 222 aa14.2□□□□□ -0.14
TARDBP-221ENST00000619555 CCER2I3L3R5 266 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 WNT10BO00744 389 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 SASH1O94885 1247 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 GTF2IP78347 998 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 EPHA10Q5JZY3 1008 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 OGFOD1Q8N543 542 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 CSRNP1Q96S65 589 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 MCOLN1Q9GZU1 580 aa14.19□□□□□ -0.14
TARDBP-221ENST00000619555 MYO3BQ8WXR4 1341 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 UBE2Q2LH0YL09 131 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 TRPA1O75762 1119 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 IFIT5Q13325 482 aaKnown RBP14.18□□□□□ -0.14
TARDBP-221ENST00000619555 LMBR1LQ6UX01 489 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 RASAL3Q86YV0 1011 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 KIAA0825Q8IV33 1275 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
TARDBP-221ENST00000619555 CD209Q9NNX6 404 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 RNF186Q9NXI6 227 aa14.18□□□□□ -0.14
TARDBP-221ENST00000619555 IRS2Q9Y4H2 1338 aa14.17□□□□□ -0.14
TARDBP-221ENST00000619555 AKAP11Q9UKA4 1901 aa14.17□□□□□ -0.14
TARDBP-221ENST00000619555 FKBP1BP68106 108 aa14.17□□□□□ -0.14
TARDBP-221ENST00000619555 DGKZQ13574 1117 aa14.17□□□□□ -0.14
TARDBP-221ENST00000619555 GRM8O00222 908 aa14.16□□□□□ -0.14
TARDBP-221ENST00000619555 TTLL12Q14166 644 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-221ENST00000619555 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
TARDBP-221ENST00000619555 ZBED3Q96IU2 234 aaPredicted RBP14.16□□□□□ -0.14
TARDBP-221ENST00000619555 SAGE1Q9NXZ1 904 aa14.16□□□□□ -0.14
TARDBP-221ENST00000619555 HDAC9Q9UKV0 1011 aa14.16□□□□□ -0.14
TARDBP-221ENST00000619555 PAPPA2Q9BXP8 1791 aa14.16□□□□□ -0.14
TARDBP-221ENST00000619555 PLIN1O60240 522 aa14.15□□□□□ -0.14
TARDBP-221ENST00000619555 SLC4A10Q6U841 1118 aa14.15□□□□□ -0.14
TARDBP-221ENST00000619555 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
TARDBP-221ENST00000619555 CERS5Q8N5B7 392 aa14.15□□□□□ -0.14
TARDBP-221ENST00000619555 C9orf78Q9NZ63 289 aaPredicted RBP14.15□□□□□ -0.14
TARDBP-221ENST00000619555 A0A1B0GUL6 1792 aa14.14□□□□□ -0.15
TARDBP-221ENST00000619555 ALDH1L1O75891 902 aa14.14□□□□□ -0.15
TARDBP-221ENST00000619555 MMP14P50281 582 aa14.14□□□□□ -0.15
TARDBP-221ENST00000619555 PRKG1Q13976 671 aa14.14□□□□□ -0.15
TARDBP-221ENST00000619555 CCDC57Q2TAC2 916 aa14.14□□□□□ -0.15
TARDBP-221ENST00000619555 TAF7LQ5H9L4 462 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms