RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 IFFO2Q5TF58 517 aa12.21□□□□□ -0.45
TP53-225ENST00000619485 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
TP53-225ENST00000619485 ZNF594Q96JF6 807 aaPredicted RBP12.21□□□□□ -0.45
TP53-225ENST00000619485 TJP1Q07157 1748 aa12.21□□□□□ -0.45
TP53-225ENST00000619485 USP42Q9H9J4 1324 aaKnown RBP12.21□□□□□ -0.45
TP53-225ENST00000619485 ALDH1L1O75891 902 aa12.21□□□□□ -0.45
TP53-225ENST00000619485 TPM3P06753 285 aa12.21□□□□□ -0.45
TP53-225ENST00000619485 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.452e-8■■■■□ 23.7
TP53-225ENST00000619485 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
TP53-225ENST00000619485 PAPPAQ13219 1627 aa12.21□□□□□ -0.46
TP53-225ENST00000619485 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.46
TP53-225ENST00000619485 RPS6KB1P23443 525 aa12.2□□□□□ -0.46
TP53-225ENST00000619485 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
TP53-225ENST00000619485 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
TP53-225ENST00000619485 HIP1O00291 1037 aa12.2□□□□□ -0.46
TP53-225ENST00000619485 ZNF165P49910 485 aa12.2□□□□□ -0.46
TP53-225ENST00000619485 CASP7P55210 303 aa12.2□□□□□ -0.46
TP53-225ENST00000619485 TOB2Q14106 344 aaPredicted RBP12.2□□□□□ -0.46
TP53-225ENST00000619485 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
TP53-225ENST00000619485 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
TP53-225ENST00000619485 ITGB4P16144 1822 aa12.2□□□□□ -0.46
TP53-225ENST00000619485 NUP188Q5SRE5 1749 aa12.2□□□□□ -0.46
TP53-225ENST00000619485 A0A087WZG4 1122 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 IGSF3O75054 1194 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 RFX5P48382 616 aaPredicted RBP12.19□□□□□ -0.46
TP53-225ENST00000619485 KCNQ4P56696 695 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 MTX1Q13505 466 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 ANKRD1Q15327 319 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 CCDC129Q6ZRS4 1044 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 UTYO14607 1347 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 A0A087WWV3 80 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 ATG3Q9NT62 314 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 ABCC6O95255 1503 aa12.19□□□□□ -0.46
TP53-225ENST00000619485 TFCP2Q12800 502 aa12.18□□□□□ -0.46
TP53-225ENST00000619485 TPD52L1Q16890 204 aaPredicted RBP12.18□□□□□ -0.46
TP53-225ENST00000619485 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
TP53-225ENST00000619485 BRF1Q92994 677 aa12.18□□□□□ -0.46
TP53-225ENST00000619485 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
TP53-225ENST00000619485 TNNT1P13805 278 aa12.18□□□□□ -0.46
TP53-225ENST00000619485 DDX19AQ9NUU7 478 aaKnown RBP12.18□□□□□ -0.46
TP53-225ENST00000619485 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 DDX58O95786 925 aaKnown RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 ZNF75DP51815 510 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 PTPN12Q05209 780 aaKnown RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 HLFQ16534 295 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 PGBD1Q96JS3 809 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.46
TP53-225ENST00000619485 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 ELP1O95163 1332 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 ZSCAN20P17040 1043 aaPredicted RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 GPTP24298 496 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 FOXO4P98177 505 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 NAA30Q147X3 362 aaPredicted RBP12.17□□□□□ -0.46
TP53-225ENST00000619485 ZSCAN25Q6NSZ9 544 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 Q6ZUG5 572 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 KCNB2Q92953 911 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 HDAC5Q9UQL6 1122 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 TNS2Q63HR2 1409 aa12.17□□□□□ -0.46
TP53-225ENST00000619485 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 ERCC4Q92889 916 aaPredicted RBP12.16□□□□□ -0.46
TP53-225ENST00000619485 TMOD3Q9NYL9 352 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 GUCY1B3Q02153 619 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 NEK1Q96PY6 1258 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 LTBP4Q8N2S1 1624 aa12.16□□□□□ -0.46
TP53-225ENST00000619485 DMTNQ08495 405 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 ARID5BQ14865 1188 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 CCDC144BQ3MJ40 725 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 FAM182BQ5T319 152 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
TP53-225ENST00000619485 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 CACTINQ8WUQ7 758 aaKnown RBP12.15□□□□□ -0.46
TP53-225ENST00000619485 DBNLQ9UJU6 430 aaKnown RBP12.15□□□□□ -0.46
TP53-225ENST00000619485 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 BECN2A8MW95 431 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 ERVV-2B6SEH9 535 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 TAF5LO75529 589 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 PLBD2Q8NHP8 589 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 GTF3C6Q969F1 213 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 FAM89AQ96GI7 184 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 DBNDD2Q9BQY9 259 aa12.15□□□□□ -0.46
TP53-225ENST00000619485 COL15A1P39059 1388 aa12.15□□□□□ -0.47
TP53-225ENST00000619485 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
TP53-225ENST00000619485 CCDC112Q8NEF3 446 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
TP53-225ENST00000619485 V9GYY5 206 aaPredicted RBP12.14□□□□□ -0.47
TP53-225ENST00000619485 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
TP53-225ENST00000619485 C11orf57Q6ZUT1 292 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms