RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ALG1Q9BT22 464 aa3.48□□□□□ -1.85
LPP-221ENST00000618621 BRWD1Q9NSI6 2320 aa3.48□□□□□ -1.85
LPP-221ENST00000618621 DNAI1Q9UI46 699 aa3.48□□□□□ -1.85
LPP-221ENST00000618621 RBM8AQ9Y5S9 174 aaKnown RBP3.48□□□□□ -1.85
LPP-221ENST00000618621 TTC21BQ7Z4L5 1316 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 TRIM75PA6NK02 468 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 GUCY1B3Q02153 619 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 RNF216Q9NWF9 866 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 TNRQ92752 1358 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 EBAG9O00559 213 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 ZBTB43O43298 467 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 IL15P40933 162 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 METAP2P50579 478 aaKnown RBP eCLIP3.47□□□□□ -1.85
LPP-221ENST00000618621 RBM6P78332 1123 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 KRT24Q2M2I5 525 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 NUP58Q9BVL2 599 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 ANKIB1Q9P2G1 1089 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 PPP4R3CPQ6ZMV5 832 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 U2AF2P26368 475 aaKnown RBP eCLIP3.47□□□□□ -1.859e-7■■■□□ 19
LPP-221ENST00000618621 CLSTN2Q9H4D0 955 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 WWC3Q9ULE0 1092 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 BICDL2A1A5D9 508 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 SMARCC1Q92922 1105 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 CALML4Q96GE6 196 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 AOX1Q06278 1338 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 URB1O60287 2271 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 DNAJC25Q9H1X3 360 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 HELLSQ9NRZ9 838 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 EXOC1Q9NV70 894 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 STAP2Q9UGK3 403 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 PSMA7O14818 248 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 KIAA0753Q2KHM9 967 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 STXBP4Q6ZWJ1 553 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 STMN4Q9H169 189 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 RALGAPBQ86X10 1494 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 ZPR1O75312 459 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 UQCRFS1P1P0C7P4 283 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CYLC1P35663 651 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 TNIP1Q15025 636 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 MLKLQ8NB16 471 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 XAGE3Q8WTP9 111 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CTNNBL1Q8WYA6 563 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 TM6SF1Q9BZW5 370 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 GOLGA8AA7E2F4 631 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 PPP1R12AO14974 1030 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 CALML3P27482 149 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 SMC1AQ14683 1233 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 PLEKHF1Q96S99 279 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 RSPH14Q9UHP6 348 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 PYCARDQ9ULZ3 195 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 EFCAB5A4FU69 1503 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 KIF4AO95239 1232 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CPA1P15085 419 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 NOS1P29475 1434 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 TTC41PQ6P2S7 1318 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 LDHCP07864 332 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 HSPA4P34932 840 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 SLC39A6Q13433 755 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 DNAJC21Q5F1R6 531 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 JAKMIP2Q96AA8 810 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.47□□□□□ -1.85
LPP-221ENST00000618621 SCAF11Q99590 1463 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 GRM8O00222 908 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CALM1P0DP23 149 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CALM2P0DP24 149 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CALM3P0DP25 149 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 IL13P35225 146 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 FAM160A1Q05DH4 1040 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 GRIPAP1Q4V328 841 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 CDC5LQ99459 802 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 ZNF652Q9Y2D9 606 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 STK24Q9Y6E0 443 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 POGZQ7Z3K3 1410 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 IFIT1BQ5T764 474 aaKnown RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 CCDC96Q2M329 555 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 RRAGBQ5VZM2 374 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 BAG1Q99933 345 aaPredicted RBP3.47□□□□□ -1.85
LPP-221ENST00000618621 ZSWIM4Q9H7M6 989 aa3.47□□□□□ -1.85
LPP-221ENST00000618621 AK2P54819 239 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 SPECC1LQ69YQ0 1117 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 CCDC129Q6ZRS4 1044 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 MTMR6Q9Y217 621 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 LUC7L2Q9Y383 392 aaKnown RBP3.46□□□□□ -1.85
LPP-221ENST00000618621 LTKP29376 864 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 CACNA2D4Q7Z3S7 1137 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 TMX1Q9H3N1 280 aa3.46□□□□□ -1.85
LPP-221ENST00000618621 MINDY4BA8MYZ0 360 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 NF2P35240 595 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 GSTO1P78417 241 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 UBXN1Q04323 297 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 TRIM14Q14142 442 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 FMNL3Q8IVF7 1028 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 KIAA1524Q8TCG1 905 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 ANKRD62A6NC57 917 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 ZNF202O95125 648 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 PDE4BQ07343 736 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 CCDC26Q8TAB7 109 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 MRPS27Q92552 414 aaKnown RBP3.46□□□□□ -1.86
LPP-221ENST00000618621 KIF2CQ99661 725 aa3.46□□□□□ -1.86
LPP-221ENST00000618621 TRMT112Q9UI30 125 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms