RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ANKRD18BA2A2Z9 1011 aa20.99■□□□□ 0.95
CNOT3-209ENST00000617930 RFC4P35249 363 aa20.99■□□□□ 0.95
CNOT3-209ENST00000617930 DTNBO60941 627 aa20.99■□□□□ 0.95
CNOT3-209ENST00000617930 MCMDC2Q4G0Z9 681 aa20.99■□□□□ 0.95
CNOT3-209ENST00000617930 PI16Q6UXB8 463 aa20.99■□□□□ 0.95
CNOT3-209ENST00000617930 NFIXQ14938 502 aa20.98■□□□□ 0.95
CNOT3-209ENST00000617930 VPS53Q5VIR6 699 aa20.98■□□□□ 0.95
CNOT3-209ENST00000617930 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.98■□□□□ 0.95
CNOT3-209ENST00000617930 AKAP2Q9Y2D5 859 aa20.98■□□□□ 0.95
CNOT3-209ENST00000617930 GYS1P13807 737 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 PTMSP20962 102 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 KCNJ4P48050 445 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 ST3GAL1Q11201 340 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 METTL24Q5JXM2 366 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 XRCC6P12956 609 aaKnown RBP eCLIP20.97■□□□□ 0.95
CNOT3-209ENST00000617930 ZMYM1Q5SVZ6 1142 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 PDRG1Q9NUG6 133 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 LIMCH1Q9UPQ0 1083 aa20.97■□□□□ 0.95
CNOT3-209ENST00000617930 FKBP4Q02790 459 aaKnown RBP eCLIP20.96■□□□□ 0.95
CNOT3-209ENST00000617930 ATP2B3Q16720 1220 aa20.96■□□□□ 0.95
CNOT3-209ENST00000617930 TSGA10IPQ3SY00 556 aa20.96■□□□□ 0.95
CNOT3-209ENST00000617930 CNNM1Q9NRU3 951 aa20.96■□□□□ 0.95
CNOT3-209ENST00000617930 SNAP23O00161 211 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 ZKSCAN1P17029 563 aaPredicted RBP20.95■□□□□ 0.94
CNOT3-209ENST00000617930 ADRA2BP18089 450 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 TCEANC2Q96MN5 208 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 RGPD3A6NKT7 1758 aaPredicted RBP20.95■□□□□ 0.94
CNOT3-209ENST00000617930 RGPD4Q7Z3J3 1758 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 A0A0G2JLW4 131 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 PDE8BO95263 885 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 BRD1O95696 1058 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 ZAP70P43403 619 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 CCDC158Q5M9N0 1113 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 FOXD4L5Q5VV16 416 aaPredicted RBP20.95■□□□□ 0.94
CNOT3-209ENST00000617930 HELBQ8NG08 1087 aaPredicted RBP20.95■□□□□ 0.94
CNOT3-209ENST00000617930 FOXD4L4Q8WXT5 416 aaPredicted RBP20.95■□□□□ 0.94
CNOT3-209ENST00000617930 CYP46A1Q9Y6A2 500 aa20.95■□□□□ 0.94
CNOT3-209ENST00000617930 TTC39AQ5SRH9 613 aa20.94■□□□□ 0.94
CNOT3-209ENST00000617930 ANO8Q9HCE9 1232 aaPredicted RBP20.94■□□□□ 0.94
CNOT3-209ENST00000617930 RNF113AO15541 343 aaKnown RBP20.94■□□□□ 0.94
CNOT3-209ENST00000617930 CYP21A2P08686 494 aa20.94■□□□□ 0.94
CNOT3-209ENST00000617930 MCAMP43121 646 aa20.94■□□□□ 0.94
CNOT3-209ENST00000617930 SLC10A5Q5PT55 438 aa20.94■□□□□ 0.94
CNOT3-209ENST00000617930 OSBP2Q969R2 916 aa20.94■□□□□ 0.94
CNOT3-209ENST00000617930 HELLSQ9NRZ9 838 aa20.94■□□□□ 0.94
CNOT3-209ENST00000617930 MAST3O60307 1309 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 RTL9Q8NET4 1388 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 M0R2C6 588 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 MRE11P49959 708 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 ME3Q16798 604 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 GORABQ5T7V8 394 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 NBPF5PQ86XG9 351 aaPredicted RBP20.93■□□□□ 0.94
CNOT3-209ENST00000617930 TPCN1Q9ULQ1 816 aa20.93■□□□□ 0.94
CNOT3-209ENST00000617930 FGFR2P21802 821 aa20.92■□□□□ 0.94
CNOT3-209ENST00000617930 SLC51AQ86UW1 340 aa20.92■□□□□ 0.94
CNOT3-209ENST00000617930 A0A1B0GUL6 1792 aa20.92■□□□□ 0.94
CNOT3-209ENST00000617930 FOXP2O15409 715 aa20.92■□□□□ 0.94
CNOT3-209ENST00000617930 SF3B3Q15393 1217 aaKnown RBP20.92■□□□□ 0.94
CNOT3-209ENST00000617930 EZH2Q15910 746 aaKnown RBP20.92■□□□□ 0.94
CNOT3-209ENST00000617930 SKOR2Q2VWA4 1001 aaPredicted RBP20.92■□□□□ 0.94
CNOT3-209ENST00000617930 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
CNOT3-209ENST00000617930 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
CNOT3-209ENST00000617930 RPS6KB1P23443 525 aa20.91■□□□□ 0.94
CNOT3-209ENST00000617930 DDR1Q08345 913 aa20.91■□□□□ 0.94
CNOT3-209ENST00000617930 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
CNOT3-209ENST00000617930 CCDC152Q4G0S7 254 aa20.91■□□□□ 0.94
CNOT3-209ENST00000617930 MCTP1Q6DN14 999 aa20.91■□□□□ 0.94
CNOT3-209ENST00000617930 ISY1Q9ULR0 285 aaKnown RBP20.91■□□□□ 0.94
CNOT3-209ENST00000617930 EN1Q05925 392 aaPredicted RBP20.9■□□□□ 0.94
CNOT3-209ENST00000617930 RNF20Q5VTR2 975 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 LMBRD1Q9NUN5 540 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 HMG20BQ9P0W2 317 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 CARMIL3Q8ND23 1372 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 HSPD1P10809 573 aaKnown RBP20.9■□□□□ 0.94
CNOT3-209ENST00000617930 TM4SF1P30408 202 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 PHKA1P46020 1223 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 PANK2Q9BZ23 570 aa20.9■□□□□ 0.94
CNOT3-209ENST00000617930 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.9■□□□□ 0.94
CNOT3-209ENST00000617930 GOLGA6L22H0YM25 854 aa20.89■□□□□ 0.93
CNOT3-209ENST00000617930 TICAM2Q86XR7 235 aa20.89■□□□□ 0.93
CNOT3-209ENST00000617930 CCDC83Q8IWF9 413 aa20.89■□□□□ 0.93
CNOT3-209ENST00000617930 NECAB1Q8N987 351 aa20.89■□□□□ 0.93
CNOT3-209ENST00000617930 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
CNOT3-209ENST00000617930 WTIPA6NIX2 430 aaPredicted RBP20.88■□□□□ 0.93
CNOT3-209ENST00000617930 PSMA5P28066 241 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 CCDC102BQ68D86 513 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 BLOC1S2Q6QNY1 142 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 CELF1Q92879 486 aaKnown RBP20.88■□□□□ 0.93
CNOT3-209ENST00000617930 NYXQ9GZU5 481 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 GRPEL1Q9HAV7 217 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 TFCP2L1Q9NZI6 479 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 PRR5LQ6MZQ0 368 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 ZNF512BQ96KM6 892 aaPredicted RBP20.88■□□□□ 0.93
CNOT3-209ENST00000617930 DSCC1Q9BVC3 393 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 PUS7LQ9H0K6 701 aaKnown RBP20.88■□□□□ 0.93
CNOT3-209ENST00000617930 PNPLA7Q6ZV29 1317 aa20.88■□□□□ 0.93
CNOT3-209ENST00000617930 GTF2E1P29083 439 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms