RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TCEANC2Q96MN5 208 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 NARFQ9UHQ1 456 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 COL4A1P02462 1669 aa20.73■□□□□ 0.91
PCDHGC3-205ENST00000617641 LY75O60449 1722 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 CYP21A2P08686 494 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 IGHMBP2P38935 993 aaKnown RBP20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 CCDC102BQ68D86 513 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 C3orf67Q6ZVT6 689 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 ARAP2Q8WZ64 1704 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 ZNF512BQ96KM6 892 aaPredicted RBP20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 DSCC1Q9BVC3 393 aa20.72■□□□□ 0.91
PCDHGC3-205ENST00000617641 LRRFIP1Q32MZ4 808 aaKnown RBP20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 TAF1LQ8IZX4 1826 aa20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 HSPD1P10809 573 aaKnown RBP20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 KRT32Q14532 448 aa20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 WASHC4Q2M389 1173 aa20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 GZF1Q9H116 711 aaPredicted RBP20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 RTCBQ9Y3I0 505 aaKnown RBP20.71■□□□□ 0.91
PCDHGC3-205ENST00000617641 BRD1O95696 1058 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 ZFYP08048 801 aaPredicted RBP20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 SLC5A1P13866 664 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 ARID4AP29374 1257 aaPredicted RBP20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 QTRT2Q9H974 415 aaKnown RBP20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 GOLGA6L22H0YM25 854 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 RGL2O15211 777 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 ZPR1O75312 459 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 MYH7P12883 1935 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 MCTP1Q6DN14 999 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 CCDC83Q8IWF9 413 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 ZSCAN31Q96LW9 406 aaPredicted RBP20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 TPCN1Q9ULQ1 816 aa20.7■□□□□ 0.9
PCDHGC3-205ENST00000617641 CASZ1Q86V15 1759 aa20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 ME3Q16798 604 aa20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 SH2B1Q9NRF2 756 aaPredicted RBP20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 GTF2E1P29083 439 aaPredicted RBP20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 ARHGEF1Q92888 912 aaKnown RBP20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 NEK1Q96PY6 1258 aa20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 PIH1D3Q9NQM4 214 aaKnown RBP20.69■□□□□ 0.9
PCDHGC3-205ENST00000617641 A0A0G2JLW4 131 aa20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 UQCRFS1P1P0C7P4 283 aa20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 ST3GAL1Q11201 340 aa20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 APPBP2Q92624 585 aa20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 CHAMP1Q96JM3 812 aa20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 CDC5LQ99459 802 aaKnown RBP20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.68■□□□□ 0.9
PCDHGC3-205ENST00000617641 PTMSP20962 102 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 CHRNDQ07001 517 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 SF3B3Q15393 1217 aaKnown RBP20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 STOX1Q6ZVD7 989 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 NECAB1Q8N987 351 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 SETDB2Q96T68 719 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 PUS7LQ9H0K6 701 aaKnown RBP20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 C4BP0C0L5 1744 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 TAF1P21675 1872 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 MYO5AQ9Y4I1 1855 aaKnown RBP20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 DTNBO60941 627 aa20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
PCDHGC3-205ENST00000617641 TTF1Q15361 905 aaPredicted RBP20.66■□□□□ 0.9
PCDHGC3-205ENST00000617641 SMC3Q9UQE7 1217 aa20.66■□□□□ 0.9
PCDHGC3-205ENST00000617641 COL24A1Q17RW2 1714 aa20.66■□□□□ 0.9
PCDHGC3-205ENST00000617641 PHF14O94880 888 aa20.66■□□□□ 0.9
PCDHGC3-205ENST00000617641 ANKRD1Q15327 319 aa20.66■□□□□ 0.9
PCDHGC3-205ENST00000617641 BCL11BQ9C0K0 894 aaPredicted RBP20.66■□□□□ 0.9
PCDHGC3-205ENST00000617641 FOXP2O15409 715 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 IDH1O75874 414 aaKnown RBP20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 ADD2P35612 726 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 SLC10A5Q5PT55 438 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 NBPF5PQ86XG9 351 aaPredicted RBP20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 ANKRD18AQ8IVF6 992 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 NYXQ9GZU5 481 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 SLC9C2Q5TAH2 1124 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 TTLL5Q6EMB2 1281 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 LRRC4BQ9NT99 713 aa20.65■□□□□ 0.9
PCDHGC3-205ENST00000617641 C4AP0C0L4 1744 aa20.64■□□□□ 0.9
PCDHGC3-205ENST00000617641 EP400Q96L91 3159 aa20.64■□□□□ 0.9
PCDHGC3-205ENST00000617641 LAMA4Q16363 1823 aa20.64■□□□□ 0.9
PCDHGC3-205ENST00000617641 RASGRF1Q13972 1273 aa20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 SKOR2Q2VWA4 1001 aaPredicted RBP20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 FAM196AQ6ZSG2 479 aa20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 CCDC24Q8N4L8 307 aa20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 SPATA5Q8NB90 893 aa20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 BCAMP50895 628 aa20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 ZSCAN25Q6NSZ9 544 aa20.64■□□□□ 0.89
PCDHGC3-205ENST00000617641 GPAA1O43292 621 aa20.63■□□□□ 0.89
PCDHGC3-205ENST00000617641 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
PCDHGC3-205ENST00000617641 GJB2P29033 226 aa20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 RFC4P35249 363 aa20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 Q6ZUG5 572 aa20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 LMBRD1Q9NUN5 540 aa20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 LRRC2Q9BYS8 371 aa20.62■□□□□ 0.89
PCDHGC3-205ENST00000617641 E7EWF7 191 aa20.61■□□□□ 0.89
PCDHGC3-205ENST00000617641 PDE6AP16499 860 aa20.61■□□□□ 0.89
PCDHGC3-205ENST00000617641 SYT1P21579 422 aa20.61■□□□□ 0.89
PCDHGC3-205ENST00000617641 TRAPPC3LQ5T215 181 aa20.61■□□□□ 0.89
PCDHGC3-205ENST00000617641 BSDC1Q9NW68 430 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms