RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CC2D2AQ9P2K1 1620 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 TSPY2A6NKD2 308 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 PDE4BQ07343 736 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 RAD50Q92878 1312 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 KIAA0586Q9BVV6 1533 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 CLSTN2Q9H4D0 955 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 STX17P56962 302 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 CHMP4BP1P59074 171 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 UBXN1Q04323 297 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 IFT81Q8WYA0 676 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 ZBTB9Q96C00 473 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 CBX8Q9HC52 389 aa12.09□□□□□ -0.47
CLTCL1-209ENST00000617103 NDUFAB1O14561 156 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 RAPGEF3O95398 923 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ANXA1P04083 346 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 UQCRFS1P1P0C7P4 283 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 CUL5Q93034 780 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 SELENOSQ9BQE4 189 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 SAMD15Q9P1V8 674 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 TNNC1P63316 161 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 CCDC122Q5T0U0 273 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 TBC1D5Q92609 795 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 DNAJC5BQ9UF47 199 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ZNF652Q9Y2D9 606 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 INPP5BP32019 993 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 PAIP2Q9BPZ3 127 aaKnown RBP12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ACTN2P35609 894 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ASIC1P78348 528 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 NAA25Q14CX7 972 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 PPP1R14CQ8TAE6 165 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 NAPGQ99747 312 aaPredicted RBP12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 ELP1O95163 1332 aa12.08□□□□□ -0.48
CLTCL1-209ENST00000617103 GRM8O00222 908 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 CRACR2BQ8N4Y2 399 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 ESR2Q92731 530 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 TMEM63CQ9P1W3 806 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 CEP83Q9Y592 693 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 NOS1P29475 1434 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 TSPYL6Q8N831 410 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
CLTCL1-209ENST00000617103 IQCGQ9H095 443 aaKnown RBP12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 NUP160Q12769 1436 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 TLDC2A0PJX2 215 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 ZBTB16Q05516 673 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 BICDL1Q6ZP65 573 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 SYCP3Q8IZU3 236 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 TBCAO75347 108 aaKnown RBP12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 MXRA7P84157 204 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 ARHGAP6O43182 974 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 KRT13P13646 458 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 FANCCQ00597 558 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 GRIPAP1Q4V328 841 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 TSGA10Q9BZW7 698 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
CLTCL1-209ENST00000617103 IQUBQ8NA54 791 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 SMC6Q96SB8 1091 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 DNAI2Q9GZS0 605 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 PER1O15534 1290 aaPredicted RBP12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 OAS2P29728 719 aaKnown RBP12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 KSR2Q6VAB6 950 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 IGSF22Q8N9C0 903 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 NEK11Q8NG66 645 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 TESK2Q96S53 571 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 CPA1P15085 419 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 TMOD2Q9NZR1 351 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 STIM2Q9P246 746 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 MTRF1LQ9UGC7 380 aaKnown RBP12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 GNAQP50148 359 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 SETDB1Q15047 1291 aa12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
CLTCL1-209ENST00000617103 ATP2A1O14983 1001 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 IDI1Q13907 227 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 TRIM14Q14142 442 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms