RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 LIMCH1Q9UPQ0 1083 aa13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 ZKSCAN1P17029 563 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 ME3Q16798 604 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 RBM27Q9P2N5 1060 aaKnown RBP13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 EP400Q96L91 3159 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 PTMAP06454 111 aaKnown RBP13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 ITPK1Q13572 414 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 KBTBD3Q8NAB2 608 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 TRMT112Q9UI30 125 aaKnown RBP13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
PCDHGA9-202ENST00000616887 ITGA6P23229 1130 aa13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 IFIT5Q13325 482 aaKnown RBP13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 TTLL11Q8NHH1 800 aa13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 IFIT1P09914 478 aaKnown RBP13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 PTF1AQ7RTS3 328 aa13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 CEP126Q9P2H0 1117 aa13.55□□□□□ -0.24
PCDHGA9-202ENST00000616887 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 CIAO1O76071 339 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 CSF1RP07333 972 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 XAGE2Q96GT9 111 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 SNAP23O00161 211 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 CYP21A2P08686 494 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 CRKLP46109 303 aaKnown RBP13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 CTSWP56202 376 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 MPNDQ8N594 471 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
PCDHGA9-202ENST00000616887 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 SIK1P57059 783 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 MCMDC2Q4G0Z9 681 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 STK3Q13188 491 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 LDHAL6AQ6ZMR3 332 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 TM6SF1Q9BZW5 370 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
PCDHGA9-202ENST00000616887 SYT1P21579 422 aa13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 GJB2P29033 226 aa13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 IL6STP40189 918 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 TOB2Q14106 344 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 METTL24Q5JXM2 366 aa13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 BLOC1S2Q6QNY1 142 aa13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.24
PCDHGA9-202ENST00000616887 SYCE3A1L190 88 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 M0R2C6 588 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 GORABQ5T7V8 394 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 SUSD4Q5VX71 490 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 MAST3O60307 1309 aa13.52□□□□□ -0.25
PCDHGA9-202ENST00000616887 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 ZAP70P43403 619 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 TTC39AQ5SRH9 613 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 TAF3Q5VWG9 929 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 KIF3AQ9Y496 699 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 RIPOR2Q9Y4F9 1068 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 RNF20Q5VTR2 975 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 OSBP2Q969R2 916 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
PCDHGA9-202ENST00000616887 GADD45BO75293 160 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 TTLL5Q6EMB2 1281 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 LRSAM1Q6UWE0 723 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 U2AF2P26368 475 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 GTF2F1P35269 517 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 ZNF34Q8IZ26 560 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 SEC31BQ9NQW1 1179 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
PCDHGA9-202ENST00000616887 ANKRD18BA2A2Z9 1011 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms