RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
LINC00649-217ENST00000616030 ZNF804BA4D1E1 1349 aa13.11□□□□□ -0.31
LINC00649-217ENST00000616030 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
LINC00649-217ENST00000616030 WTIPA6NIX2 430 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-217ENST00000616030 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
LINC00649-217ENST00000616030 H7C1D1 291 aa13.1□□□□□ -0.31
LINC00649-217ENST00000616030 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
LINC00649-217ENST00000616030 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-217ENST00000616030 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
LINC00649-217ENST00000616030 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
LINC00649-217ENST00000616030 MYO3BQ8WXR4 1341 aa13.1□□□□□ -0.31
LINC00649-217ENST00000616030 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
LINC00649-217ENST00000616030 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
LINC00649-217ENST00000616030 RASSF10A6NK89 507 aa13.09□□□□□ -0.31
LINC00649-217ENST00000616030 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
LINC00649-217ENST00000616030 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
LINC00649-217ENST00000616030 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
LINC00649-217ENST00000616030 API5Q9BZZ5 524 aaKnown RBP13.09□□□□□ -0.31
LINC00649-217ENST00000616030 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
LINC00649-217ENST00000616030 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
LINC00649-217ENST00000616030 DACT2Q5SW24 774 aa13.08□□□□□ -0.32
LINC00649-217ENST00000616030 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
LINC00649-217ENST00000616030 RIPOR2Q9Y4F9 1068 aa13.08□□□□□ -0.32
LINC00649-217ENST00000616030 EGFRP00533 1210 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 IL1R1P14778 569 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 KLRK1P26718 216 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 INTS3Q68E01 1043 aaKnown RBP13.07□□□□□ -0.32
LINC00649-217ENST00000616030 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
LINC00649-217ENST00000616030 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
LINC00649-217ENST00000616030 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 BCAR3O75815 825 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
LINC00649-217ENST00000616030 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 KIF4BQ2VIQ3 1234 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 CST9Q5W186 159 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 CDC37L1Q7L3B6 337 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 CD209Q9NNX6 404 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 MROH5Q6ZUA9 1318 aa13.06□□□□□ -0.32
LINC00649-217ENST00000616030 G3V3G9 751 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 MS4A1P11836 297 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
LINC00649-217ENST00000616030 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
LINC00649-217ENST00000616030 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 CHMP3Q9Y3E7 222 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 TLL2Q9Y6L7 1015 aa13.05□□□□□ -0.32
LINC00649-217ENST00000616030 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
LINC00649-217ENST00000616030 ZBTB22O15209 634 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
LINC00649-217ENST00000616030 TAF5LO75529 589 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 TBC1D10BQ4KMP7 808 aaPredicted RBP13.04□□□□□ -0.32
LINC00649-217ENST00000616030 TAF7LQ5H9L4 462 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 MYOZ2Q9NPC6 264 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
LINC00649-217ENST00000616030 SNAP23O00161 211 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 TRAF5O00463 557 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 PLIN1O60240 522 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 TRIM27P14373 513 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 KCNJ4P48050 445 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 PTPN12Q05209 780 aaKnown RBP13.03□□□□□ -0.32
LINC00649-217ENST00000616030 MTX1Q13505 466 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 ZBED3Q96IU2 234 aaPredicted RBP13.03□□□□□ -0.32
LINC00649-217ENST00000616030 GLIS2Q9BZE0 524 aaPredicted RBP13.03□□□□□ -0.32
LINC00649-217ENST00000616030 PUS3Q9BZE2 481 aaKnown RBP13.03□□□□□ -0.32
LINC00649-217ENST00000616030 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 FAM205AQ6ZU69 1335 aa13.03□□□□□ -0.32
LINC00649-217ENST00000616030 COL1A1P02452 1464 aaPredicted RBP13.03□□□□□ -0.32
LINC00649-217ENST00000616030 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.32
LINC00649-217ENST00000616030 UBTFL1P0CB47 393 aaPredicted RBP13.02□□□□□ -0.33
LINC00649-217ENST00000616030 FGFR2P21802 821 aa13.02□□□□□ -0.33
LINC00649-217ENST00000616030 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
LINC00649-217ENST00000616030 FMR1Q06787 632 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00649-217ENST00000616030 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.33
LINC00649-217ENST00000616030 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
LINC00649-217ENST00000616030 SAPCD2Q86UD0 394 aa13.02□□□□□ -0.33
LINC00649-217ENST00000616030 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.33
LINC00649-217ENST00000616030 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
LINC00649-217ENST00000616030 GGA3Q9NZ52 723 aa13.02□□□□□ -0.33
LINC00649-217ENST00000616030 CIAO1O76071 339 aa13.01□□□□□ -0.33
LINC00649-217ENST00000616030 PDE8BO95263 885 aa13.01□□□□□ -0.33
LINC00649-217ENST00000616030 VEGFBP49765 207 aa13.01□□□□□ -0.33
LINC00649-217ENST00000616030 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
LINC00649-217ENST00000616030 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
LINC00649-217ENST00000616030 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
LINC00649-217ENST00000616030 TDRD7Q8NHU6 1098 aaKnown RBP13.01□□□□□ -0.33
LINC00649-217ENST00000616030 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
LINC00649-217ENST00000616030 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
LINC00649-217ENST00000616030 WNT10BO00744 389 aa13□□□□□ -0.33
LINC00649-217ENST00000616030 SASH1O94885 1247 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms