RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 MCM4P33991 863 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 ATP8B2P98198 1209 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 MTA1Q13330 715 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 RETREG3Q86VR2 466 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 HSCBQ8IWL3 235 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 KCNH5Q8NCM2 988 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 MYRIPQ8NFW9 859 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 ZBTB9Q96C00 473 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 THAP11Q96EK4 314 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 SGSM3Q96HU1 749 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 PRIMPOLQ96LW4 560 aa7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 SLKQ9H2G2 1235 aaPredicted RBP7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 FEZ2Q9UHY8 353 aaPredicted RBP7.97□□□□□ -1.13
CDKAL1-204ENST00000613575 GNAI2P04899 355 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 GNAI3P08754 354 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 HOXB7P09629 217 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 LIG1P18858 919 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 GUCY2CP25092 1073 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 C16orf71Q8IYS4 520 aaPredicted RBP7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 ZNF513Q8N8E2 541 aaPredicted RBP7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 NKX2-3Q8TAU0 364 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 PRR7Q8TB68 274 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 USP26Q9BXU7 913 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 MED4Q9NPJ6 270 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 OGFRQ9NZT2 677 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 RAD50Q92878 1312 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 CEMIPQ8WUJ3 1361 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 NWD1Q149M9 1564 aa7.96□□□□□ -1.13
CDKAL1-204ENST00000613575 DLG5Q8TDM6 1919 aa7.96□□□□□ -1.14
CDKAL1-204ENST00000613575 CEP170BQ9Y4F5 1589 aaPredicted RBP7.96□□□□□ -1.14
CDKAL1-204ENST00000613575 MPHOSPH10O00566 681 aaKnown RBP7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 ITGBL1O95965 494 aaPredicted RBP7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 ADH1BP00325 375 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 RFC5P40937 340 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 NOP2P46087 812 aaKnown RBP7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 FLIIQ13045 1269 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 PPP2R2DQ66LE6 453 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 CLEC17AQ6ZS10 378 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 STK31Q9BXU1 1019 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 MAP3K5Q99683 1374 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 SALL3Q9BXA9 1300 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 PPP1R12AO14974 1030 aaPredicted RBP7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 GTF2F1P35269 517 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 ATP2B3Q16720 1220 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 LRCH2Q5VUJ6 765 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 ANKRD23Q86SG2 305 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 IL17RAQ96F46 866 aa7.95□□□□□ -1.14
CDKAL1-204ENST00000613575 MSH6P52701 1360 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 GOLGA6L6A8MZA4 724 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 AP1G2O75843 785 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 SDSP20132 328 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 TRDNQ13061 729 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 RABEP1Q15276 862 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 PDCL2Q8N4E4 241 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 MKL1Q969V6 931 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 SLC6A16Q9GZN6 736 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 STAP2Q9UGK3 403 aa7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 NOL7Q9UMY1 257 aaKnown RBP7.94□□□□□ -1.14
CDKAL1-204ENST00000613575 PIK3C2AO00443 1686 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 F6X3S4 739 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 GOLGA6L22H0YM25 854 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 K7ELQ4 463 aaPredicted RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 EPB41L2O43491 1005 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 DHX16O60231 1041 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 NEFHP12036 1026 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 PDE1AP54750 535 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 EIF4A1P60842 406 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 PSME1Q06323 249 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 RAB3GAP1Q15042 981 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 AMOTQ4VCS5 1084 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 CCDC91Q7Z6B0 441 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 ARHGEF25Q86VW2 580 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 EXOC8Q8IYI6 725 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 HELBQ8NG08 1087 aaPredicted RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 CALR3Q96L12 384 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 USP44Q9H0E7 712 aa7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 RIMS1Q86UR5 1692 aaKnown RBP7.93□□□□□ -1.14
CDKAL1-204ENST00000613575 CTAGE5O15320 804 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 TMEM259Q4ZIN3 620 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 FAM160A2Q8N612 972 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 GOLGA6L1Q8N7Z2 621 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 OTUD7AQ8TE49 926 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 SSH3Q8TE77 659 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 SRCIN1Q9C0H9 1055 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 RGS17Q9UGC6 210 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 RSPH14Q9UHP6 348 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 MST1RQ04912 1400 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 NCAPD2Q15021 1401 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 ADGRL3Q9HAR2 1447 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 KLHL33A6NCF5 533 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 TRAK2O60296 914 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 REC8O95072 547 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 GCP02774 474 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 FKBP5Q13451 457 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 MSS51Q4VC12 460 aa7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 PLEKHO1Q53GL0 409 aaPredicted RBP7.92□□□□□ -1.14
CDKAL1-204ENST00000613575 AKAP4Q5JQC9 854 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms