RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CALCOCO2Q13137 446 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 FCHSD1Q86WN1 690 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 STAG1Q8WVM7 1258 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 EVI5LQ96CN4 794 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 PARP2Q9UGN5 583 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 FAF1Q9UNN5 650 aaPredicted RBP9.89□□□□□ -0.83
TTC28-208ENST00000612946 RRP36Q96EU6 259 aaKnown RBP9.89□□□□□ -0.83
TTC28-208ENST00000612946 HVCN1Q96D96 273 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 PPP1R12CQ9BZL4 782 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 MYO1AQ9UBC5 1043 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 ZNF75DP51815 510 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 WDR78Q5VTH9 848 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 C8orf74Q6P047 294 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 SCOCQ9UIL1 159 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 UTP11Q9Y3A2 253 aaKnown RBP9.89□□□□□ -0.83
TTC28-208ENST00000612946 DAAM1Q9Y4D1 1078 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 RIPOR2Q9Y4F9 1068 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 TTC39AQ5SRH9 613 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 DUSP27Q5VZP5 1158 aa9.89□□□□□ -0.83
TTC28-208ENST00000612946 CNOT10Q9H9A5 744 aaKnown RBP9.89□□□□□ -0.83
TTC28-208ENST00000612946 PSMA7O14818 248 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 STK3Q13188 491 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 AACSQ86V21 672 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 CCDC42Q96M95 316 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 SELENOSQ9BQE4 189 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 CFAP157Q5JU67 520 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 CWC27Q6UX04 472 aaKnown RBP9.88□□□□□ -0.83
TTC28-208ENST00000612946 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
TTC28-208ENST00000612946 SEC63Q9UGP8 760 aaKnown RBP9.88□□□□□ -0.83
TTC28-208ENST00000612946 MIS12Q9H081 205 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 ZC4H2Q9NQZ6 224 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 TTC41PQ6P2S7 1318 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 GGT6Q6P531 493 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 PDE6BP35913 854 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 MAP3K7CLP57077 242 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 BICDL1Q6ZP65 573 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 USP6NLQ92738 828 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 I3L4J1 428 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 LMNAP02545 664 aaKnown RBP9.88□□□□□ -0.83
TTC28-208ENST00000612946 TMTC1Q8IUR5 882 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 WHAMMQ8TF30 809 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 SAAL1Q96ER3 474 aa9.88□□□□□ -0.83
TTC28-208ENST00000612946 ATP2B1P20020 1258 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 CALML4Q96GE6 196 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 TCP11L1Q9NUJ3 509 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 HMGB3O15347 200 aaKnown RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 RNF40O75150 1001 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 FAM160A1Q05DH4 1040 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 TNIP1Q15025 636 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 CAPZA3Q96KX2 299 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 CTTNBP2NLQ9P2B4 639 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 NOP2P46087 812 aaKnown RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 NBPF6Q5VWK0 638 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 SYT10Q6XYQ8 523 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 NBPF5PQ86XG9 351 aaPredicted RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 NBPF4Q96M43 638 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 TXLNGQ9NUQ3 528 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 SKIP12755 728 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 PNMA8AQ86V59 439 aaPredicted RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 TUBB6Q9BUF5 446 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 GIMAP6Q6P9H5 292 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 TMEM57Q8N5G2 664 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 CAPS2Q9BXY5 557 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 POLR1AO95602 1720 aaPredicted RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 HAUS8Q9BT25 410 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 TPD52P55327 224 aaPredicted RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 TMX3Q96JJ7 454 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
TTC28-208ENST00000612946 NUP58Q9BVL2 599 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 ZSWIM4Q9H7M6 989 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 PPP1R9AQ9ULJ8 1098 aa9.87□□□□□ -0.83
TTC28-208ENST00000612946 NMIQ13287 307 aaPredicted RBP9.86□□□□□ -0.83
TTC28-208ENST00000612946 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 EXOC1Q9NV70 894 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 KLHL14Q9P2G3 628 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 PAIP2BQ9ULR5 123 aaKnown RBP9.86□□□□□ -0.83
TTC28-208ENST00000612946 PHLPP2Q6ZVD8 1323 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 SSH2Q76I76 1423 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 MYH10P35580 1976 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 SSRP1Q08945 709 aaKnown RBP9.86□□□□□ -0.83
TTC28-208ENST00000612946 NEK1Q96PY6 1258 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 HOMER3Q9NSC5 361 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 MTHFSP49914 203 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 AOX1Q06278 1338 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 COG7P83436 770 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 TTC19Q6DKK2 380 aaPredicted RBP9.86□□□□□ -0.83
TTC28-208ENST00000612946 BATF3Q9NR55 127 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 EIF2S2P20042 333 aaKnown RBP9.86□□□□□ -0.83
TTC28-208ENST00000612946 GOLGA8QA0A0J9YX86 632 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 GOLGA8OA6NCC3 632 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 GOLGA8NF8WBI6 632 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
TTC28-208ENST00000612946 DRP2Q13474 957 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 GOLGA8BA8MQT2 603 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 CHUKO15111 745 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 SYCE1Q8N0S2 351 aa9.86□□□□□ -0.83
TTC28-208ENST00000612946 ARMC2Q8NEN0 867 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms