RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 CYP46A1Q9Y6A2 500 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 SASH1O94885 1247 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 CDC37L1Q7L3B6 337 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
PCDHGC3-202ENST00000611950 GRM8O00222 908 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 CEBPZQ03701 1054 aaKnown RBP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 G3BP1Q13283 466 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 LARP1BQ659C4 914 aaKnown RBP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 ARMCX6Q7L4S7 300 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 LINS1Q8NG48 757 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 DDX11Q96FC9 970 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 KDM6AO15550 1401 aaPredicted RBP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 AP5Z1O43299 807 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 KCNQ2O43526 872 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 KIAA2012Q0VF49 1180 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 CREB3L3Q68CJ9 461 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 CCDC129Q6ZRS4 1044 aa12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
PCDHGC3-202ENST00000611950 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 CPDO75976 1380 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 IGKV5-2P06315 115 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 UBE2HP62256 183 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 EPHA10Q5JZY3 1008 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 CALR3Q96L12 384 aaKnown RBP12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 SEC62Q99442 399 aaKnown RBP12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 UTYO14607 1347 aa12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
PCDHGC3-202ENST00000611950 C5P01031 1676 aa12.58□□□□□ -0.39
PCDHGC3-202ENST00000611950 ATP5J2-PTCD1G3V325 749 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 PTCD1O75127 700 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 GPATCH3Q96I76 525 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 LIG1P18858 919 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 MYD88Q99836 296 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 MEGF6O75095 1541 aa12.58□□□□□ -0.4
PCDHGC3-202ENST00000611950 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 TTC6Q86TZ1 520 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 SLC52A2Q9HAB3 445 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 SLC27A2O14975 620 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 JAK2O60674 1132 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 GTF2A1P52655 376 aaPredicted RBP12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 DDB1Q16531 1140 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 ERC1Q8IUD2 1116 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 RBM28Q9NW13 759 aaKnown RBP12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 SBF2Q86WG5 1849 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 A0A087WWV3 80 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 DDX58O95786 925 aaKnown RBP12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 NECTIN1Q15223 517 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 FBXW7Q969H0 707 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 EVI5LQ96CN4 794 aa12.57□□□□□ -0.4
PCDHGC3-202ENST00000611950 PHKG2P15735 406 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 MTA1Q13330 715 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 LUZP1Q86V48 1076 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 XAGE3Q8WTP9 111 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 SCN11AQ9UI33 1791 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 BLOC1S2Q6QNY1 142 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 COPS6Q7L5N1 327 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 DONSONQ9NYP3 566 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 UTRNP46939 3433 aa12.56□□□□□ -0.4
PCDHGC3-202ENST00000611950 NEURL1BA8MQ27 555 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 DDX46Q7L014 1031 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 KAT6BQ8WYB5 2073 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 NOP2P46087 812 aaKnown RBP12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 NOLC1Q14978 699 aaKnown RBP eCLIP12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 UBE3BQ7Z3V4 1068 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 ANKRD23Q86SG2 305 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 ATP6V1DQ9Y5K8 247 aa12.55□□□□□ -0.4
PCDHGC3-202ENST00000611950 GCKRQ14397 625 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 ITFG2Q969R8 447 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 PDGFDQ9GZP0 370 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 DACT1Q9NYF0 836 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms