RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 OTUD7BQ6GQQ9 843 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 CREBRFQ8IUR6 639 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 AMOTL1Q8IY63 956 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 BRMS1Q9HCU9 246 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 ZNF500O60304 480 aaPredicted RBP7.42□□□□□ -1.22
SNX13-213ENST00000611725 PCCAP05165 728 aaPredicted RBP7.42□□□□□ -1.22
SNX13-213ENST00000611725 STX1AQ16623 288 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 KAZALD1Q96I82 304 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 CARD10Q9BWT7 1032 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 MYOM1P52179 1685 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 USP32Q8NFA0 1604 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 MINDY4BA8MYZ0 360 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 BIN1O00499 593 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 ZBTB43O43298 467 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 FAM160A1Q05DH4 1040 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 TMEM67Q5HYA8 995 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 NOL10Q9BSC4 688 aaKnown RBP7.42□□□□□ -1.22
SNX13-213ENST00000611725 ZNF652Q9Y2D9 606 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 USP42Q9H9J4 1324 aaKnown RBP7.42□□□□□ -1.22
SNX13-213ENST00000611725 GPAA1O43292 621 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 DDB1Q16531 1140 aa7.42□□□□□ -1.22
SNX13-213ENST00000611725 DIP2BQ9P265 1576 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 NBPF26B4DH59 902 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 SPTLC2O15270 562 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 ZAP70P43403 619 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 NBPF14Q5TI25 921 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 NBPF10Q6P3W6 841 aaKnown RBP7.41□□□□□ -1.22
SNX13-213ENST00000611725 NBPF15Q8N660 670 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 IQSEC3Q9UPP2 1182 aaPredicted RBP7.41□□□□□ -1.22
SNX13-213ENST00000611725 SERPINC1P01008 464 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 DHX8Q14562 1220 aaKnown RBP7.41□□□□□ -1.22
SNX13-213ENST00000611725 PDIA6Q15084 440 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 CLSTN2Q9H4D0 955 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 REREQ9P2R6 1566 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 E7EWF7 191 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 PFKFB2O60825 505 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 RABL6Q3YEC7 729 aaPredicted RBP7.41□□□□□ -1.22
SNX13-213ENST00000611725 BRINP3Q76B58 766 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 TMEM87AQ8NBN3 555 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 CDC5LQ99459 802 aaKnown RBP7.41□□□□□ -1.22
SNX13-213ENST00000611725 LIG1P18858 919 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 ZMYM1Q5SVZ6 1142 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 ZC3H13Q5T200 1668 aaKnown RBP7.41□□□□□ -1.22
SNX13-213ENST00000611725 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 HEG1Q9ULI3 1381 aa7.41□□□□□ -1.22
SNX13-213ENST00000611725 ELP1O95163 1332 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 C1orf167Q5SNV9 1468 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 NEMFO60524 1076 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 CAVIN4Q5BKX8 364 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 ANKRD20A12PQ8NF67 263 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 PRIMPOLQ96LW4 560 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 USP28Q96RU2 1077 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 MAST3O60307 1309 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 TPM1P09493 284 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 CCDC152Q4G0S7 254 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 C16orf45Q96MC5 204 aaPredicted RBP7.4□□□□□ -1.22
SNX13-213ENST00000611725 ATG3Q9NT62 314 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 ASAP1Q9ULH1 1129 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 SMTNL1A8MU46 457 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 CFAP100Q494V2 611 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 BRAPQ7Z569 592 aa7.4□□□□□ -1.22
SNX13-213ENST00000611725 NIP7Q9Y221 180 aaKnown RBP eCLIP7.4□□□□□ -1.22
SNX13-213ENST00000611725 CCDC102BQ68D86 513 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 IQCA1Q86XH1 822 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 CCDC144CPQ8IYA2 1237 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 PDILTQ8N807 584 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 ANGEL1Q9UNK9 670 aaKnown RBP7.4□□□□□ -1.23
SNX13-213ENST00000611725 PES1O00541 588 aaKnown RBP7.4□□□□□ -1.23
SNX13-213ENST00000611725 PI16Q6UXB8 463 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 ZBTB1Q9Y2K1 713 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 ARHGAP23Q9P227 1491 aa7.4□□□□□ -1.23
SNX13-213ENST00000611725 CTCFLQ8NI51 663 aaPredicted RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 PIBF1Q8WXW3 757 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 ZNF274Q96GC6 653 aaPredicted RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 CEP170BQ9Y4F5 1589 aaPredicted RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 RANBP6O60518 1105 aaKnown RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 CIAO1O76071 339 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 FGAP02671 866 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 SLC26A6Q9BXS9 759 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 ATP6V1AP38606 617 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 MYSM1Q5VVJ2 828 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 CNNM2Q9H8M5 875 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 PPLO60437 1756 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 PDE8AO60658 829 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 MBD4O95243 580 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 MARCKSP29966 332 aaPredicted RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 TICAM2Q86XR7 235 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 OSBP2Q969R2 916 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 UTP14AQ9BVJ6 771 aaKnown RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 RXRAP19793 462 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 PARP10Q53GL7 1025 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 NSUN7Q8NE18 718 aaKnown RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 FBXO18Q8NFZ0 1043 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 LPIN2Q92539 896 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 TMX4Q9H1E5 349 aaPredicted RBP7.39□□□□□ -1.23
SNX13-213ENST00000611725 PREX1Q8TCU6 1659 aa7.39□□□□□ -1.23
SNX13-213ENST00000611725 PTGS1P23219 599 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms