RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
PCDHGB1-202ENST00000611598 OVOS2A0A0G2JMS6 1433 aa17.69■□□□□ 0.42
PCDHGB1-202ENST00000611598 ESCO1Q5FWF5 840 aa17.69■□□□□ 0.42
PCDHGB1-202ENST00000611598 CEP57L1Q8IYX8 460 aa17.69■□□□□ 0.42
PCDHGB1-202ENST00000611598 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 FBXO38Q6PIJ6 1188 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 SYTL4Q96C24 671 aaPredicted RBP17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 SALL1Q9NSC2 1324 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 A0A1B0GVL5 298 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 GCP02774 474 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 ZNF397Q8NF99 534 aaPredicted RBP17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 PCDHA7Q9UN72 937 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 AXIN2Q9Y2T1 843 aa17.68■□□□□ 0.42
PCDHGB1-202ENST00000611598 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 SIPA1L3O60292 1781 aaPredicted RBP17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 NPHP1O15259 732 aa17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 SLFN14P0C7P3 912 aa17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 FMR1NBQ8N0W7 255 aaPredicted RBP17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 KBTBD3Q8NAB2 608 aa17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 ZNF396Q96N95 335 aaPredicted RBP17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 C5P01031 1676 aa17.67■□□□□ 0.42
PCDHGB1-202ENST00000611598 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 GOLIM4O00461 696 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 PTCD1O75127 700 aaKnown RBP17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 GABPB1Q06547 395 aaPredicted RBP17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 DPCR1Q3MIW9 517 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 OTUD7BQ6GQQ9 843 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 SH3TC1Q8TE82 1336 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 NDUFA8P51970 172 aa17.66■□□□□ 0.42
PCDHGB1-202ENST00000611598 E7EWF7 191 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 PDIA3P30101 505 aaKnown RBP17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 E4F1Q66K89 784 aaPredicted RBP17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 ANKRD13DQ6ZTN6 518 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 LRRN4CLQ8ND94 238 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 ERO1AQ96HE7 468 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 SDF4Q9BRK5 362 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 AGXT2Q9BYV1 514 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 CARMIL3Q8ND23 1372 aa17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 FDPSP14324 419 aaKnown RBP17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 MRPS27Q92552 414 aaKnown RBP17.65■□□□□ 0.42
PCDHGB1-202ENST00000611598 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 KRT222Q8N1A0 295 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 ZNF496Q96IT1 587 aaPredicted RBP17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 XPO4Q9C0E2 1151 aaKnown RBP17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 ST7Q9NRC1 585 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 NEDD4P46934 1319 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 SLU7O95391 586 aaKnown RBP17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 ARMCX5Q6P1M9 558 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 OSBPL5Q9H0X9 879 aaPredicted RBP17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 CLIC4Q9Y696 253 aa17.64■□□□□ 0.41
PCDHGB1-202ENST00000611598 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 BIN1O00499 593 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 SMC2O95347 1197 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 TTLL5Q6EMB2 1281 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 NEUROD6Q96NK8 337 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 IFNKQ9P0W0 207 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 A0A087WZG4 1122 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 GSDMDP57764 484 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 ATL3Q6DD88 541 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 TMC6Q7Z403 805 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 FMNL2Q96PY5 1086 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 NAT10Q9H0A0 1025 aaKnown RBP17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 KCND1Q9NSA2 647 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 PAG1Q9NWQ8 432 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 ZNF446Q9NWS9 450 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 ABCC6O95255 1503 aa17.63■□□□□ 0.41
PCDHGB1-202ENST00000611598 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 TIMM10P62072 90 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 PPP1R13BQ96KQ4 1090 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 DSCC1Q9BVC3 393 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 KIAA1468Q9P260 1216 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 TERF2Q15554 542 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 ADALQ6DHV7 355 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 LMBR1LQ6UX01 489 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 LINC00301Q8NCQ3 95 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 GJB4Q9NTQ9 266 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 RTEL1Q9NZ71 1219 aa17.62■□□□□ 0.41
PCDHGB1-202ENST00000611598 KDM6AO15550 1401 aaPredicted RBP17.61■□□□□ 0.41
PCDHGB1-202ENST00000611598 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
PCDHGB1-202ENST00000611598 FAM53CQ9NYF3 392 aa17.61■□□□□ 0.41
PCDHGB1-202ENST00000611598 MAST3O60307 1309 aa17.61■□□□□ 0.41
PCDHGB1-202ENST00000611598 ERCC6LQ2NKX8 1250 aa17.61■□□□□ 0.41
PCDHGB1-202ENST00000611598 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
PCDHGB1-202ENST00000611598 RAB11FIP4Q86YS3 637 aa17.6■□□□□ 0.41
PCDHGB1-202ENST00000611598 ZNF274Q96GC6 653 aaPredicted RBP17.6■□□□□ 0.41
PCDHGB1-202ENST00000611598 HELLSQ9NRZ9 838 aa17.6■□□□□ 0.41
PCDHGB1-202ENST00000611598 IMPACTQ9P2X3 320 aa17.6■□□□□ 0.41
PCDHGB1-202ENST00000611598 CASP7P55210 303 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms