RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 NF2P35240 595 aa9.15□□□□□ -0.94
MUC1-221ENST00000610359 GJA5P36382 358 aa9.15□□□□□ -0.94
MUC1-221ENST00000610359 WNK4Q96J92 1243 aa9.15□□□□□ -0.94
MUC1-221ENST00000610359 PTPN18Q99952 460 aa9.15□□□□□ -0.94
MUC1-221ENST00000610359 ZC3H12CQ9C0D7 883 aaKnown RBP9.15□□□□□ -0.94
MUC1-221ENST00000610359 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.15□□□□□ -0.94
MUC1-221ENST00000610359 TRMT112Q9UI30 125 aaKnown RBP9.15□□□□□ -0.94
MUC1-221ENST00000610359 U3KPZ7 1027 aaPredicted RBP9.15□□□□□ -0.94
MUC1-221ENST00000610359 SSC5DA1L4H1 1573 aa9.15□□□□□ -0.95
MUC1-221ENST00000610359 SPEF2Q9C093 1822 aa9.15□□□□□ -0.95
MUC1-221ENST00000610359 HTATSF1O43719 755 aaKnown RBP9.14□□□□□ -0.95
MUC1-221ENST00000610359 ZBTB48P10074 688 aaPredicted RBP9.14□□□□□ -0.95
MUC1-221ENST00000610359 SF3B3Q15393 1217 aaKnown RBP9.14□□□□□ -0.95
MUC1-221ENST00000610359 UBE2Q1Q7Z7E8 422 aa9.14□□□□□ -0.95
MUC1-221ENST00000610359 NBPF11Q86T75 865 aa9.14□□□□□ -0.95
MUC1-221ENST00000610359 SH3TC2Q8TF17 1288 aa9.14□□□□□ -0.95
MUC1-221ENST00000610359 SLC10A4Q96EP9 437 aa9.14□□□□□ -0.95
MUC1-221ENST00000610359 MXD3Q9BW11 206 aa9.14□□□□□ -0.95
MUC1-221ENST00000610359 PODXL2Q9NZ53 605 aa9.14□□□□□ -0.95
MUC1-221ENST00000610359 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
MUC1-221ENST00000610359 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
MUC1-221ENST00000610359 UFL1O94874 794 aa9.13□□□□□ -0.95
MUC1-221ENST00000610359 SASH1O94885 1247 aa9.13□□□□□ -0.95
MUC1-221ENST00000610359 MAP3K11Q16584 847 aa9.13□□□□□ -0.95
MUC1-221ENST00000610359 TTC28Q96AY4 2481 aa9.13□□□□□ -0.95
MUC1-221ENST00000610359 A0A1W2PPC1 479 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
MUC1-221ENST00000610359 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 G3V3G9 751 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 RPS8P62241 208 aaKnown RBP9.12□□□□□ -0.95
MUC1-221ENST00000610359 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
MUC1-221ENST00000610359 MTFR1Q15390 333 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 DCAF8Q5TAQ9 597 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 Q7L0L9 218 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
MUC1-221ENST00000610359 HSP90AB3PQ58FF7 597 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 DACT2Q5SW24 774 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 COPS6Q7L5N1 327 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 PNISRQ8TF01 805 aaKnown RBP9.11□□□□□ -0.95
MUC1-221ENST00000610359 FAM89AQ96GI7 184 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 ZBED3Q96IU2 234 aaPredicted RBP9.11□□□□□ -0.95
MUC1-221ENST00000610359 ARHGAP39Q9C0H5 1083 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 GGA1Q9UJY5 639 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 STXBP5LQ9Y2K9 1186 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 MGAMO43451 1857 aa9.11□□□□□ -0.95
MUC1-221ENST00000610359 EYSQ5T1H1 3165 aa9.1□□□□□ -0.95
MUC1-221ENST00000610359 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
MUC1-221ENST00000610359 AIMP1Q12904 312 aaKnown RBP9.1□□□□□ -0.95
MUC1-221ENST00000610359 OTUD7BQ6GQQ9 843 aa9.1□□□□□ -0.95
MUC1-221ENST00000610359 DEFB123Q8N688 67 aa9.1□□□□□ -0.95
MUC1-221ENST00000610359 XAGE3Q8WTP9 111 aa9.1□□□□□ -0.95
MUC1-221ENST00000610359 ANKIB1Q9P2G1 1089 aa9.1□□□□□ -0.95
MUC1-221ENST00000610359 STAP2Q9UGK3 403 aa9.1□□□□□ -0.95
MUC1-221ENST00000610359 COL1A1P02452 1464 aaPredicted RBP9.09□□□□□ -0.95
MUC1-221ENST00000610359 PRUNE2Q8WUY3 3088 aa9.09□□□□□ -0.95
MUC1-221ENST00000610359 DOCK3Q8IZD9 2030 aa9.09□□□□□ -0.95
MUC1-221ENST00000610359 U2AF1L5P0DN76 240 aaPredicted RBP9.09□□□□□ -0.95
MUC1-221ENST00000610359 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.95
MUC1-221ENST00000610359 CNGB1Q14028 1251 aaPredicted RBP9.09□□□□□ -0.95
MUC1-221ENST00000610359 PODNQ7Z5L7 613 aa9.09□□□□□ -0.95
MUC1-221ENST00000610359 APOBEC3FQ8IUX4 373 aaKnown RBP9.09□□□□□ -0.95
MUC1-221ENST00000610359 MS4A4AQ96JQ5 239 aa9.09□□□□□ -0.95
MUC1-221ENST00000610359 HTATIP2Q9BUP3 242 aa9.09□□□□□ -0.95
MUC1-221ENST00000610359 MTMR10Q9NXD2 777 aa9.09□□□□□ -0.95
MUC1-221ENST00000610359 MYH3P11055 1940 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 USP2O75604 605 aaPredicted RBP9.08□□□□□ -0.96
MUC1-221ENST00000610359 GJA8P48165 433 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
MUC1-221ENST00000610359 GPR153Q6NV75 609 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
MUC1-221ENST00000610359 BRI3BPQ8WY22 251 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 ISCA1Q9BUE6 129 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 DEFB129Q9H1M3 183 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 NR2E3Q9Y5X4 410 aa9.08□□□□□ -0.96
MUC1-221ENST00000610359 LAMA2P24043 3122 aaKnown RBP9.07□□□□□ -0.96
MUC1-221ENST00000610359 UNCXA6NJT0 531 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 ATP5J2-PTCD1G3V325 749 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 CTGFP29279 349 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 ARHGEF6Q15052 776 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
MUC1-221ENST00000610359 FAM43AQ8N2R8 423 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 OGFOD1Q8N543 542 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 PCDHAC2Q9Y5I4 1007 aa9.07□□□□□ -0.96
MUC1-221ENST00000610359 MUC3AQ02505 3323 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 IRS4O14654 1257 aaPredicted RBP9.06□□□□□ -0.96
MUC1-221ENST00000610359 PPP1R12BO60237 982 aaPredicted RBP9.06□□□□□ -0.96
MUC1-221ENST00000610359 GJB1P08034 283 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 ATP2B4P23634 1241 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 LACTBP83111 547 aaPredicted RBP9.06□□□□□ -0.96
MUC1-221ENST00000610359 NBPF12Q5TAG4 269 aaPredicted RBP9.06□□□□□ -0.96
MUC1-221ENST00000610359 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 ANKRD13DQ6ZTN6 518 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 KIAA0825Q8IV33 1275 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 OPTNQ96CV9 577 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 ELP3Q9H9T3 547 aa9.06□□□□□ -0.96
MUC1-221ENST00000610359 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms