RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 FRMD3A2A2Y4 597 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 EXOC5O00471 708 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 NEMFO60524 1076 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 RPS6KA5O75582 802 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 CDC25BP30305 580 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 SCRN1Q12765 414 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 DCTN1Q14203 1278 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 IQCB1Q15051 598 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 CNNM3Q8NE01 707 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 CD248Q9HCU0 757 aa13.8□□□□□ -0.2
CTCFL-217ENST00000608425 KLHL33A6NCF5 533 aa13.79□□□□□ -0.2
CTCFL-217ENST00000608425 NR1I2O75469 434 aa13.79□□□□□ -0.2
CTCFL-217ENST00000608425 EME2A4GXA9 379 aaPredicted RBP13.79□□□□□ -0.2
CTCFL-217ENST00000608425 EFCAB8A8MWE9 144 aa13.79□□□□□ -0.2
CTCFL-217ENST00000608425 GOLGA6L19H0YKK7 550 aa13.79□□□□□ -0.2
CTCFL-217ENST00000608425 ETF1P62495 437 aaKnown RBP13.79□□□□□ -0.2
CTCFL-217ENST00000608425 GNL3LQ9NVN8 582 aaKnown RBP13.79□□□□□ -0.2
CTCFL-217ENST00000608425 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
CTCFL-217ENST00000608425 SKAP2O75563 359 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-217ENST00000608425 ARMC3Q5W041 872 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 N4BP2L2Q92802 583 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-217ENST00000608425 ESYT1Q9BSJ8 1104 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 PARP3Q9Y6F1 533 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 HOXC9P31274 260 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 ARMCX5Q6P1M9 558 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 MRFAP1L1Q96HT8 127 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 EYA1Q99502 592 aa13.78□□□□□ -0.2
CTCFL-217ENST00000608425 MKRN1Q9UHC7 482 aaKnown RBP13.78□□□□□ -0.2
CTCFL-217ENST00000608425 MAP2K7O14733 419 aa13.77□□□□□ -0.2
CTCFL-217ENST00000608425 ELF1P32519 619 aa13.77□□□□□ -0.2
CTCFL-217ENST00000608425 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.2
CTCFL-217ENST00000608425 TBC1D8BQ0IIM8 1120 aa13.77□□□□□ -0.2
CTCFL-217ENST00000608425 TRDNQ13061 729 aa13.77□□□□□ -0.2
CTCFL-217ENST00000608425 NBPF10Q6P3W6 841 aaKnown RBP13.77□□□□□ -0.2
CTCFL-217ENST00000608425 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.2
CTCFL-217ENST00000608425 ERCC4Q92889 916 aaPredicted RBP13.77□□□□□ -0.2
CTCFL-217ENST00000608425 GJB2P29033 226 aa13.77□□□□□ -0.21
CTCFL-217ENST00000608425 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
CTCFL-217ENST00000608425 CCDC83Q8IWF9 413 aa13.77□□□□□ -0.21
CTCFL-217ENST00000608425 SRGAP3O43295 1099 aa13.77□□□□□ -0.21
CTCFL-217ENST00000608425 ABTB2Q8N961 1025 aa13.77□□□□□ -0.21
CTCFL-217ENST00000608425 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
CTCFL-217ENST00000608425 TBC1D22AQ8WUA7 517 aa13.77□□□□□ -0.21
CTCFL-217ENST00000608425 CCDC9Q9Y3X0 531 aaKnown RBP13.77□□□□□ -0.21
CTCFL-217ENST00000608425 CACNA1FO60840 1977 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 CAND2O75155 1236 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
CTCFL-217ENST00000608425 ZC3H12AQ5D1E8 599 aaKnown RBP13.76□□□□□ -0.21
CTCFL-217ENST00000608425 RUFY3Q7L099 469 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 MCM10Q7L590 875 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 KIF1AQ12756 1690 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 PPFIA4O75335 1185 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 AK2P54819 239 aa13.76□□□□□ -0.21
CTCFL-217ENST00000608425 RBM28Q9NW13 759 aaKnown RBP13.76□□□□□ -0.21
CTCFL-217ENST00000608425 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
CTCFL-217ENST00000608425 LRRFIP1Q32MZ4 808 aaKnown RBP13.75□□□□□ -0.21
CTCFL-217ENST00000608425 GPR161Q8N6U8 529 aaKnown RBP13.75□□□□□ -0.21
CTCFL-217ENST00000608425 ATP6V1DQ9Y5K8 247 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 MYO1FO00160 1098 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 C21orf2O43822 256 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
CTCFL-217ENST00000608425 THOC1Q96FV9 657 aaKnown RBP13.75□□□□□ -0.21
CTCFL-217ENST00000608425 MSH6P52701 1360 aa13.75□□□□□ -0.21
CTCFL-217ENST00000608425 NBPF9Q3BBW0 867 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 ZNF513Q8N8E2 541 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-217ENST00000608425 RILPL2Q969X0 211 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 CLSTN2Q9H4D0 955 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 KCND1Q9NSA2 647 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 IRAK4Q9NWZ3 460 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 GPTP24298 496 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 EHD4Q9H223 541 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 SLIT3O75094 1523 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 TRPM3Q9HCF6 1732 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-217ENST00000608425 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-217ENST00000608425 CCT5P48643 541 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 TMC6Q7Z403 805 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 KCNB2Q92953 911 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 WDR24Q96S15 920 aa13.74□□□□□ -0.21
CTCFL-217ENST00000608425 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 EIF5P55010 431 aaKnown RBP13.73□□□□□ -0.21
CTCFL-217ENST00000608425 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 MCM8Q9UJA3 840 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 BECN2A8MW95 431 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 AP1G2O75843 785 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
CTCFL-217ENST00000608425 ZKSCAN4Q969J2 545 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-217ENST00000608425 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
CTCFL-217ENST00000608425 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms