RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ZSCAN31Q96LW9 406 aaPredicted RBP18.89■□□□□ 0.61
CTSA-214ENST00000606788 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
CTSA-214ENST00000606788 SH2B1Q9NRF2 756 aaPredicted RBP18.88■□□□□ 0.61
CTSA-214ENST00000606788 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
CTSA-214ENST00000606788 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
CTSA-214ENST00000606788 SLC9C2Q5TAH2 1124 aa18.88■□□□□ 0.61
CTSA-214ENST00000606788 MPHOSPH8Q99549 860 aa18.88■□□□□ 0.61
CTSA-214ENST00000606788 PDE8AO60658 829 aa18.87■□□□□ 0.61
CTSA-214ENST00000606788 EIF5P55010 431 aaKnown RBP18.87■□□□□ 0.61
CTSA-214ENST00000606788 INCENPQ9NQS7 918 aa18.87■□□□□ 0.61
CTSA-214ENST00000606788 E7EWF7 191 aa18.87■□□□□ 0.61
CTSA-214ENST00000606788 GPR108Q9NPR9 543 aa18.87■□□□□ 0.61
CTSA-214ENST00000606788 PIH1D3Q9NQM4 214 aaKnown RBP18.87■□□□□ 0.61
CTSA-214ENST00000606788 HMG20BQ9P0W2 317 aa18.87■□□□□ 0.61
CTSA-214ENST00000606788 PALLDQ8WX93 1383 aa18.86■□□□□ 0.61
CTSA-214ENST00000606788 USPL1Q5W0Q7 1092 aa18.86■□□□□ 0.61
CTSA-214ENST00000606788 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 CCDC102BQ68D86 513 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 SH3TC1Q8TE82 1336 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 GTF2E1P29083 439 aaPredicted RBP18.85■□□□□ 0.61
CTSA-214ENST00000606788 SCRN1Q12765 414 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 WWC3Q9ULE0 1092 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 PDE8BO95263 885 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 FGAP02671 866 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 ZNF34Q8IZ26 560 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 NKX2-3Q8TAU0 364 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 TRIM44Q96DX7 344 aaPredicted RBP18.85■□□□□ 0.61
CTSA-214ENST00000606788 UTP14AQ9BVJ6 771 aaKnown RBP18.85■□□□□ 0.61
CTSA-214ENST00000606788 HELLSQ9NRZ9 838 aa18.85■□□□□ 0.61
CTSA-214ENST00000606788 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.85■□□□□ 0.61
CTSA-214ENST00000606788 SPATA31A5Q5VU36 1347 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 SPATA31A7Q8IWB4 1347 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 COL16A1Q07092 1604 aaPredicted RBP18.84■□□□□ 0.61
CTSA-214ENST00000606788 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 GPAA1O43292 621 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 RXRAP19793 462 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 BCAMP50895 628 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 KRT32Q14532 448 aa18.84■□□□□ 0.61
CTSA-214ENST00000606788 PAPPAQ13219 1627 aa18.83■□□□□ 0.61
CTSA-214ENST00000606788 PLCB2Q00722 1185 aa18.83■□□□□ 0.61
CTSA-214ENST00000606788 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.61
CTSA-214ENST00000606788 SRP68Q9UHB9 627 aaKnown RBP18.83■□□□□ 0.61
CTSA-214ENST00000606788 FOXP2O15409 715 aa18.83■□□□□ 0.6
CTSA-214ENST00000606788 TOM1O60784 492 aa18.83■□□□□ 0.6
CTSA-214ENST00000606788 CAMTA2O94983 1202 aa18.83■□□□□ 0.6
CTSA-214ENST00000606788 ANKRD1Q15327 319 aa18.83■□□□□ 0.6
CTSA-214ENST00000606788 FAM184AQ8NB25 1140 aa18.83■□□□□ 0.6
CTSA-214ENST00000606788 H3BQV1 296 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 CAMK4Q16566 473 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 FTOQ9C0B1 505 aaKnown RBP eCLIP18.82■□□□□ 0.6
CTSA-214ENST00000606788 MBD3O95983 291 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 GIMAP6Q6P9H5 292 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 DHX32Q7L7V1 743 aaKnown RBP18.82■□□□□ 0.6
CTSA-214ENST00000606788 SLC51AQ86UW1 340 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 JAG2Q9Y219 1238 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 PHF14O94880 888 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 CCDC144CPQ8IYA2 1237 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 GJB4Q9NTQ9 266 aa18.82■□□□□ 0.6
CTSA-214ENST00000606788 ZNF445P59923 1031 aa18.81■□□□□ 0.6
CTSA-214ENST00000606788 GTF3C6Q969F1 213 aa18.81■□□□□ 0.6
CTSA-214ENST00000606788 COL14A1Q05707 1796 aaKnown RBP18.81■□□□□ 0.6
CTSA-214ENST00000606788 ZNF532Q9HCE3 1301 aa18.81■□□□□ 0.6
CTSA-214ENST00000606788 MIGA1Q8NAN2 632 aa18.81■□□□□ 0.6
CTSA-214ENST00000606788 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
CTSA-214ENST00000606788 CDHR2Q9BYE9 1310 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 ERFEQ4G0M1 354 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 VGLL2Q8N8G2 317 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 ABCF2Q9UG63 623 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 DOT1LQ8TEK3 1739 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 TOMM22Q9NS69 142 aa18.8■□□□□ 0.6
CTSA-214ENST00000606788 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.79■□□□□ 0.6
CTSA-214ENST00000606788 SLIT2O94813 1529 aa18.79■□□□□ 0.6
CTSA-214ENST00000606788 NPHP1O15259 732 aa18.79■□□□□ 0.6
CTSA-214ENST00000606788 RASGRF1Q13972 1273 aa18.79■□□□□ 0.6
CTSA-214ENST00000606788 MAGEB6Q8N7X4 407 aa18.79■□□□□ 0.6
CTSA-214ENST00000606788 APPBP2Q92624 585 aa18.79■□□□□ 0.6
CTSA-214ENST00000606788 TSGA10IPQ3SY00 556 aa18.78■□□□□ 0.6
CTSA-214ENST00000606788 AMIGO3Q86WK7 504 aa18.78■□□□□ 0.6
CTSA-214ENST00000606788 IMMTQ16891 758 aaKnown RBP18.78■□□□□ 0.6
CTSA-214ENST00000606788 ATP6V1DQ9Y5K8 247 aa18.78■□□□□ 0.6
CTSA-214ENST00000606788 JCADQ9P266 1359 aa18.78■□□□□ 0.6
CTSA-214ENST00000606788 PTPDC1A2A3K4 754 aa18.77■□□□□ 0.6
CTSA-214ENST00000606788 PRKAB2O43741 272 aa18.77■□□□□ 0.6
CTSA-214ENST00000606788 GYG1P46976 350 aa18.77■□□□□ 0.6
CTSA-214ENST00000606788 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
CTSA-214ENST00000606788 RRP12Q5JTH9 1297 aaKnown RBP18.77■□□□□ 0.6
CTSA-214ENST00000606788 ARMT1Q9H993 441 aa18.77■□□□□ 0.6
CTSA-214ENST00000606788 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
CTSA-214ENST00000606788 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.6
CTSA-214ENST00000606788 ZNF213O14771 459 aa18.77■□□□□ 0.59
CTSA-214ENST00000606788 PRC1O43663 620 aa18.77■□□□□ 0.59
CTSA-214ENST00000606788 CTDNEP1O95476 244 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms