RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ANKRD2Q9GZV1 360 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 PALD1Q9ULE6 856 aa26■■□□□ 1.75
USP6NL-204ENST00000606752 RNF113AO15541 343 aaKnown RBP25.99■■□□□ 1.75
USP6NL-204ENST00000606752 SF3B2Q13435 895 aaKnown RBP25.99■■□□□ 1.75
USP6NL-204ENST00000606752 TTF1Q15361 905 aaPredicted RBP25.99■■□□□ 1.75
USP6NL-204ENST00000606752 PI16Q6UXB8 463 aa25.99■■□□□ 1.75
USP6NL-204ENST00000606752 HELLSQ9NRZ9 838 aa25.99■■□□□ 1.75
USP6NL-204ENST00000606752 TNRC6CQ9HCJ0 1690 aaKnown RBP25.99■■□□□ 1.75
USP6NL-204ENST00000606752 TAF1P21675 1872 aa25.99■■□□□ 1.75
USP6NL-204ENST00000606752 RPGRQ92834 1020 aaKnown RBP25.98■■□□□ 1.75
USP6NL-204ENST00000606752 MAP4K1Q92918 833 aa25.98■■□□□ 1.75
USP6NL-204ENST00000606752 CHGBP05060 677 aa25.98■■□□□ 1.75
USP6NL-204ENST00000606752 ZFYP08048 801 aaPredicted RBP25.98■■□□□ 1.75
USP6NL-204ENST00000606752 SLC15A2Q16348 729 aa25.98■■□□□ 1.75
USP6NL-204ENST00000606752 ZMYM1Q5SVZ6 1142 aa25.98■■□□□ 1.75
USP6NL-204ENST00000606752 ZNF589Q86UQ0 364 aaPredicted RBP25.98■■□□□ 1.75
USP6NL-204ENST00000606752 ARAP2Q8WZ64 1704 aa25.97■■□□□ 1.75
USP6NL-204ENST00000606752 BCAMP50895 628 aa25.97■■□□□ 1.75
USP6NL-204ENST00000606752 KLRG2A4D1S0 409 aaPredicted RBP25.96■■□□□ 1.75
USP6NL-204ENST00000606752 CYP2E1P05181 493 aaPredicted RBP25.96■■□□□ 1.75
USP6NL-204ENST00000606752 STK32BQ9NY57 414 aa25.96■■□□□ 1.75
USP6NL-204ENST00000606752 HMG20BQ9P0W2 317 aa25.96■■□□□ 1.75
USP6NL-204ENST00000606752 BAG6P46379 1132 aa25.95■■□□□ 1.75
USP6NL-204ENST00000606752 SPATA5Q8NB90 893 aa25.95■■□□□ 1.75
USP6NL-204ENST00000606752 SEC62Q99442 399 aaKnown RBP25.95■■□□□ 1.75
USP6NL-204ENST00000606752 ANO8Q9HCE9 1232 aaPredicted RBP25.95■■□□□ 1.75
USP6NL-204ENST00000606752 CD2BP2O95400 341 aaKnown RBP25.95■■□□□ 1.74
USP6NL-204ENST00000606752 RBM17Q96I25 401 aaKnown RBP25.95■■□□□ 1.74
USP6NL-204ENST00000606752 ST18O60284 1047 aa25.94■■□□□ 1.74
USP6NL-204ENST00000606752 RASGRF1Q13972 1273 aa25.94■■□□□ 1.74
USP6NL-204ENST00000606752 NECTIN1Q15223 517 aa25.94■■□□□ 1.74
USP6NL-204ENST00000606752 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.94■■□□□ 1.74
USP6NL-204ENST00000606752 RBM8AQ9Y5S9 174 aaKnown RBP25.94■■□□□ 1.74
USP6NL-204ENST00000606752 AKAP11Q9UKA4 1901 aa25.94■■□□□ 1.74
USP6NL-204ENST00000606752 MMP10P09238 476 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 HOXA10P31260 410 aaPredicted RBP25.93■■□□□ 1.74
USP6NL-204ENST00000606752 KCNJ4P48050 445 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 CAVIN4Q5BKX8 364 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 IL27Q8NEV9 243 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 KCNB2Q92953 911 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 BRIP1Q9BX63 1249 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 SNX14Q9Y5W7 946 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 WTIPA6NIX2 430 aaPredicted RBP25.93■■□□□ 1.74
USP6NL-204ENST00000606752 SLFNL1Q499Z3 407 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 ZSCAN25Q6NSZ9 544 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 GNL3LQ9NVN8 582 aaKnown RBP25.93■■□□□ 1.74
USP6NL-204ENST00000606752 PARP3Q9Y6F1 533 aa25.93■■□□□ 1.74
USP6NL-204ENST00000606752 ZNF804BA4D1E1 1349 aa25.92■■□□□ 1.74
USP6NL-204ENST00000606752 PIH1D3Q9NQM4 214 aaKnown RBP25.92■■□□□ 1.74
USP6NL-204ENST00000606752 K7ELQ4 463 aaPredicted RBP25.91■■□□□ 1.74
USP6NL-204ENST00000606752 NEK4P51957 841 aa25.91■■□□□ 1.74
USP6NL-204ENST00000606752 PRPF40BQ6NWY9 871 aaKnown RBP25.91■■□□□ 1.74
USP6NL-204ENST00000606752 CCDC129Q6ZRS4 1044 aa25.91■■□□□ 1.74
USP6NL-204ENST00000606752 RASEFQ8IZ41 740 aa25.91■■□□□ 1.74
USP6NL-204ENST00000606752 BBOX1O75936 387 aa25.91■■□□□ 1.74
USP6NL-204ENST00000606752 GYG1P46976 350 aa25.91■■□□□ 1.74
USP6NL-204ENST00000606752 FAM84BQ96KN1 310 aaPredicted RBP25.91■■□□□ 1.74
USP6NL-204ENST00000606752 CRAMP1Q96RY5 1269 aa25.91■■□□□ 1.74
USP6NL-204ENST00000606752 APPBP2Q92624 585 aa25.9■■□□□ 1.74
USP6NL-204ENST00000606752 OSBP2Q969R2 916 aa25.9■■□□□ 1.74
USP6NL-204ENST00000606752 ZKSCAN1P17029 563 aaPredicted RBP25.89■■□□□ 1.74
USP6NL-204ENST00000606752 WASHC4Q2M389 1173 aa25.89■■□□□ 1.74
USP6NL-204ENST00000606752 CREB3L3Q68CJ9 461 aa25.89■■□□□ 1.74
USP6NL-204ENST00000606752 FBXO33Q7Z6M2 555 aa25.89■■□□□ 1.74
USP6NL-204ENST00000606752 DEFB132Q7Z7B7 95 aa25.89■■□□□ 1.74
USP6NL-204ENST00000606752 VPS37DQ86XT2 251 aa25.89■■□□□ 1.74
USP6NL-204ENST00000606752 MAST3O60307 1309 aa25.89■■□□□ 1.73
USP6NL-204ENST00000606752 A0A1B0GUL6 1792 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 SLC9C2Q5TAH2 1124 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 RNF20Q5VTR2 975 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 MSL1Q68DK7 614 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 IDH1O75874 414 aaKnown RBP25.88■■□□□ 1.73
USP6NL-204ENST00000606752 ADD2P35612 726 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 ANKIB1Q9P2G1 1089 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 LEMD3Q9Y2U8 911 aa25.88■■□□□ 1.73
USP6NL-204ENST00000606752 U3KPZ7 1027 aaPredicted RBP25.88■■□□□ 1.73
USP6NL-204ENST00000606752 UBE3CQ15386 1083 aa25.87■■□□□ 1.73
USP6NL-204ENST00000606752 DSCC1Q9BVC3 393 aa25.87■■□□□ 1.73
USP6NL-204ENST00000606752 M0R2C6 588 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 SLC27A2O14975 620 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 XDHP47989 1333 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 NRXN2Q9P2S2 1712 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 PDE6BP35913 854 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 MCM2P49736 904 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 MAP3K12Q12852 859 aa25.86■■□□□ 1.73
USP6NL-204ENST00000606752 SEMA3EO15041 775 aa25.85■■□□□ 1.73
USP6NL-204ENST00000606752 HIBADHP31937 336 aaKnown RBP25.85■■□□□ 1.73
USP6NL-204ENST00000606752 UPF3BQ9BZI7 483 aaKnown RBP25.85■■□□□ 1.73
USP6NL-204ENST00000606752 TM6SF1Q9BZW5 370 aa25.85■■□□□ 1.73
USP6NL-204ENST00000606752 DENND2AQ9ULE3 1009 aa25.85■■□□□ 1.73
USP6NL-204ENST00000606752 SRGNP10124 158 aa25.84■■□□□ 1.73
USP6NL-204ENST00000606752 PDE6AP16499 860 aa25.84■■□□□ 1.73
USP6NL-204ENST00000606752 KLRK1P26718 216 aa25.84■■□□□ 1.73
USP6NL-204ENST00000606752 TSGA10IPQ3SY00 556 aa25.84■■□□□ 1.73
USP6NL-204ENST00000606752 TMC4Q7Z404 712 aa25.84■■□□□ 1.73
USP6NL-204ENST00000606752 SPRYD3Q8NCJ5 442 aa25.84■■□□□ 1.73
USP6NL-204ENST00000606752 PUS7LQ9H0K6 701 aaKnown RBP25.84■■□□□ 1.73
USP6NL-204ENST00000606752 IQSEC3Q9UPP2 1182 aaPredicted RBP25.84■■□□□ 1.73
USP6NL-204ENST00000606752 SLKQ9H2G2 1235 aaPredicted RBP25.84■■□□□ 1.73
USP6NL-204ENST00000606752 IRS2Q9Y4H2 1338 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms