RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 ZNF215Q9UL58 517 aaPredicted RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 A0A1B0GUL7 405 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 MINDY4BA8MYZ0 360 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 TPM1P09493 284 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 HOXB7P09629 217 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 IFIT5Q13325 482 aaKnown RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 PGBD1Q96JS3 809 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 ALG1Q9BT22 464 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 SLC26A6Q9BXS9 759 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 BABAM1Q9NWV8 329 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 ABCF2Q9UG63 623 aa8.52□□□□□ -1.05
SATB1-218ENST00000606296 IQSEC3Q9UPP2 1182 aaPredicted RBP8.52□□□□□ -1.05
SATB1-218ENST00000606296 VIRMAQ69YN4 1812 aaKnown RBP8.51□□□□□ -1.05
SATB1-218ENST00000606296 AP5Z1O43299 807 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 METAP2P50579 478 aaKnown RBP eCLIP8.51□□□□□ -1.05
SATB1-218ENST00000606296 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 MYL10Q9BUA6 226 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 IFIT3O14879 490 aaKnown RBP8.51□□□□□ -1.05
SATB1-218ENST00000606296 NEMFO60524 1076 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 COL9A3Q14050 684 aaPredicted RBP8.51□□□□□ -1.05
SATB1-218ENST00000606296 TOB2Q14106 344 aaPredicted RBP8.51□□□□□ -1.05
SATB1-218ENST00000606296 TMCO3Q6UWJ1 677 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 KBTBD3Q8NAB2 608 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 TMEM87AQ8NBN3 555 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 GOLGA8AA7E2F4 631 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
SATB1-218ENST00000606296 GSDMDP57764 484 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 GNG11P61952 73 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 TRIM22Q8IYM9 498 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 NCOA7Q8NI08 942 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 FAM89AQ96GI7 184 aa8.51□□□□□ -1.05
SATB1-218ENST00000606296 E7EWF7 191 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 RNF113AO15541 343 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 EPB41L2O43491 1005 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 SLU7O95391 586 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 LRRC24Q50LG9 513 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 SLC9C2Q5TAH2 1124 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 PHKBQ93100 1093 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 SALL3Q9BXA9 1300 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 KDRP35968 1356 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 CAVIN2O95810 425 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 ATP5JP18859 108 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 IARSP41252 1262 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 GOLGA8FQ08AF8 430 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 GOLGA8DPQ0D2H9 430 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 SART3Q15020 963 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 CCDC144BQ3MJ40 725 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 UTP14AQ9BVJ6 771 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 XPO4Q9C0E2 1151 aaKnown RBP8.5□□□□□ -1.05
SATB1-218ENST00000606296 NAPBQ9H115 298 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 IGKV5-2P06315 115 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 SLC4A8Q2Y0W8 1093 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 ARHGAP29Q52LW3 1261 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 TMEM67Q5HYA8 995 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 KRT222Q8N1A0 295 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 ZKSCAN3Q9BRR0 538 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 FRMPD1Q5SYB0 1578 aa8.5□□□□□ -1.05
SATB1-218ENST00000606296 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 IL15P40933 162 aaPredicted RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 TSR1Q2NL82 804 aaKnown RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 PPFIBP1Q86W92 1011 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 CCDC66A2RUB6 948 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 CDKL5O76039 1030 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 KARSQ15046 597 aaKnown RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 LRRC8AQ8IWT6 810 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 KCNG4Q8TDN1 519 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 MPHOSPH8Q99549 860 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 PUS3Q9BZE2 481 aaKnown RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 SLC12A7Q9Y666 1083 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 ADCY9O60503 1353 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 AFMP43652 599 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 NDUFA8P51970 172 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 STX17P56962 302 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 ERCC6LQ2NKX8 1250 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 GOLGA6L1Q8N7Z2 621 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 PCDHA7Q9UN72 937 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 AKAP2Q9Y2D5 859 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 CLIC4Q9Y696 253 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 USP27XA6NNY8 438 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 B4E1Z4 1266 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 HSPD1P10809 573 aaKnown RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 SLC52A2Q9HAB3 445 aa8.49□□□□□ -1.05
SATB1-218ENST00000606296 TRMT112Q9UI30 125 aaKnown RBP8.49□□□□□ -1.05
SATB1-218ENST00000606296 ZNF202O95125 648 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 ADD1P35611 737 aaKnown RBP8.48□□□□□ -1.05
SATB1-218ENST00000606296 DPCR1Q3MIW9 517 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 NSUN7Q8NE18 718 aaKnown RBP8.48□□□□□ -1.05
SATB1-218ENST00000606296 UBAC1Q9BSL1 405 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 KIF2AO00139 706 aaPredicted RBP8.48□□□□□ -1.05
SATB1-218ENST00000606296 GPS2Q13227 327 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 OGFRQ9NZT2 677 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 DIP2CQ9Y2E4 1556 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 ZBTB43O43298 467 aa8.48□□□□□ -1.05
SATB1-218ENST00000606296 CCP110O43303 1012 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms