RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EP400NLQ6ZTU2 488 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 DEPDC4Q8N2C3 294 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 HELQQ8TDG4 1101 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 SETDB2Q96T68 719 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 APBA2Q99767 749 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 DNAJC25Q9H1X3 360 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 ALG2Q9H553 416 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 RETREG1Q9H6L5 497 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 FANCLQ9NW38 375 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 PIK3CDO00329 1044 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 KRT18P05783 430 aaKnown RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 CCDC172P0C7W6 258 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 SEC13P55735 322 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 SEPT2Q15019 361 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 EAPPQ56P03 285 aaPredicted RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 PDXDC1Q6P996 788 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 WNT2BQ93097 391 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 LRCH3Q96II8 777 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 GJD4Q96KN9 370 aaPredicted RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 NELL2Q99435 816 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 NBPF3Q9H094 633 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 INPP5FQ9Y2H2 1132 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 SIGLEC1Q9BZZ2 1709 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 C9orf84Q5VXU9 1444 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 GEMIN4P57678 1058 aaKnown RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 ERAP2Q6P179 960 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 POTEGQ6S5H5 508 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 ATRIPQ8WXE1 791 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 POGKQ9P215 609 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 ASAP1Q9ULH1 1129 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 PLIN1O60240 522 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 PIP5K1CO60331 668 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 RACK1P63244 317 aaKnown RBP5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 ZC3H12AQ5D1E8 599 aaKnown RBP5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 CT47A1Q5JQC4 288 aaPredicted RBP5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 TAS1R3Q7RTX0 852 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 MICALL1Q8N3F8 863 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 TIGD1Q96MW7 591 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 CEP89Q96ST8 783 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 NCAPGQ9BPX3 1015 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 TGIF2Q9GZN2 237 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 AKAP2Q9Y2D5 859 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 KIF3AQ9Y496 699 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 SUPT6HQ7KZ85 1726 aaKnown RBP5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 UQCRHLA0A096LP55 91 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 A6NCN8 305 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 MTA2O94776 668 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 UQCRHP07919 91 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 USP17L8P0C7I0 530 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 ATICP31939 592 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 WASHC5Q12768 1159 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 C12orf49Q9H741 205 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 RABL2BQ9UNT1 228 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 SMC3Q9UQE7 1217 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 RABGAP1Q9Y3P9 1069 aa5.97□□□□□ -1.45
SPTBN1-206ENST00000602898 KIF16BQ96L93 1317 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 VPS8Q8N3P4 1428 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 SHTN1A0MZ66 631 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 GOLGA8CPA6NN73 597 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 PRPF3O43395 683 aaKnown RBP5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 RAPGEF3O95398 923 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 XRCC5P13010 732 aaKnown RBP5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 CLK1P49759 484 aaKnown RBP5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 MECOMQ03112 1051 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 ARID5AQ03989 594 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 GRAMD1BQ3KR37 738 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 BRDTQ58F21 947 aaPredicted RBP5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 SPECC1Q5M775 1068 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 SNX32Q86XE0 403 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 FLCNQ8NFG4 579 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 PPM1EQ8WY54 764 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 ZNF516Q92618 1163 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 E2F7Q96AV8 911 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 PDGFDQ9GZP0 370 aaPredicted RBP5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 SMC4Q9NTJ3 1288 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 TMEM63CQ9P1W3 806 aa5.96□□□□□ -1.45
SPTBN1-206ENST00000602898 NINLQ9Y2I6 1382 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 MYO3AQ8NEV4 1616 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 CLIP1P30622 1438 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 TRIM64CA6NLI5 447 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 PPP1R12AO14974 1030 aaPredicted RBP5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 TSPAN6O43657 245 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 LILRB3O75022 631 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 INMTO95050 263 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 HMGN5P82970 282 aaKnown RBP5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 CTR9Q6PD62 1173 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 C16orf87Q6PH81 154 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 TMEM87BQ96K49 555 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 RMI1Q9H9A7 625 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 HOMER2Q9NSB8 354 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 CDK13Q14004 1512 aaKnown RBP5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 RAPGEF2Q9Y4G8 1499 aa5.96□□□□□ -1.46
SPTBN1-206ENST00000602898 SPTLC1O15269 473 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 ATF3P18847 181 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 CLASRPQ8N2M8 674 aaKnown RBP5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 MRFAP1L1Q96HT8 127 aa5.95□□□□□ -1.46
SPTBN1-206ENST00000602898 SRPK1Q96SB4 655 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms