RNA–Protein interactions for RNA: ENST00000602670.1

SFXN2-209, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-209ENST00000602670 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SFXN2-209ENST00000602670 CCDC152Q4G0S7 254 aa16.54■□□□□ 0.24
SFXN2-209ENST00000602670 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
SFXN2-209ENST00000602670 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
SFXN2-209ENST00000602670 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
SFXN2-209ENST00000602670 CEP290O15078 2479 aa16.54■□□□□ 0.24
SFXN2-209ENST00000602670 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
SFXN2-209ENST00000602670 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
SFXN2-209ENST00000602670 MANSC4A6NHS7 340 aaPredicted RBP16.53■□□□□ 0.24
SFXN2-209ENST00000602670 IGF2BP3O00425 579 aaKnown RBP eCLIP16.53■□□□□ 0.24
SFXN2-209ENST00000602670 HOXB7P09629 217 aa16.53■□□□□ 0.24
SFXN2-209ENST00000602670 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
SFXN2-209ENST00000602670 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
SFXN2-209ENST00000602670 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
SFXN2-209ENST00000602670 FZD1Q9UP38 647 aa16.53■□□□□ 0.24
SFXN2-209ENST00000602670 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
SFXN2-209ENST00000602670 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.24
SFXN2-209ENST00000602670 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
SFXN2-209ENST00000602670 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
SFXN2-209ENST00000602670 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
SFXN2-209ENST00000602670 COLQQ9Y215 455 aaPredicted RBP16.52■□□□□ 0.24
SFXN2-209ENST00000602670 SSC5DA1L4H1 1573 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 PDE8AO60658 829 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 INHBEP58166 350 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 ERO1AQ96HE7 468 aa16.51■□□□□ 0.23
SFXN2-209ENST00000602670 COL1A1P02452 1464 aaPredicted RBP16.5■□□□□ 0.23
SFXN2-209ENST00000602670 PCCAP05165 728 aaPredicted RBP16.5■□□□□ 0.23
SFXN2-209ENST00000602670 ZBTB48P10074 688 aaPredicted RBP16.5■□□□□ 0.23
SFXN2-209ENST00000602670 CAP1Q01518 475 aa16.5■□□□□ 0.23
SFXN2-209ENST00000602670 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
SFXN2-209ENST00000602670 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
SFXN2-209ENST00000602670 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
SFXN2-209ENST00000602670 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
SFXN2-209ENST00000602670 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
SFXN2-209ENST00000602670 MAP3K11Q16584 847 aa16.49■□□□□ 0.23
SFXN2-209ENST00000602670 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
SFXN2-209ENST00000602670 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
SFXN2-209ENST00000602670 ZBED3Q96IU2 234 aaPredicted RBP16.49■□□□□ 0.23
SFXN2-209ENST00000602670 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
SFXN2-209ENST00000602670 CLMNQ96JQ2 1002 aa16.49■□□□□ 0.23
SFXN2-209ENST00000602670 MMP14P50281 582 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 CRHR2Q13324 411 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 MYD88Q99836 296 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 EFCC1Q9HA90 598 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
SFXN2-209ENST00000602670 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
SFXN2-209ENST00000602670 TXNRD3Q86VQ6 643 aa16.47■□□□□ 0.23
SFXN2-209ENST00000602670 KIAA0825Q8IV33 1275 aa16.47■□□□□ 0.23
SFXN2-209ENST00000602670 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
SFXN2-209ENST00000602670 DEFB129Q9H1M3 183 aa16.47■□□□□ 0.23
SFXN2-209ENST00000602670 CCT4P50991 539 aaKnown RBP16.46■□□□□ 0.23
SFXN2-209ENST00000602670 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
SFXN2-209ENST00000602670 DUSP27Q5VZP5 1158 aa16.46■□□□□ 0.23
SFXN2-209ENST00000602670 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
SFXN2-209ENST00000602670 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
SFXN2-209ENST00000602670 CWC25Q9NXE8 425 aaPredicted RBP16.46■□□□□ 0.23
SFXN2-209ENST00000602670 TRIM35Q9UPQ4 493 aa16.46■□□□□ 0.23
SFXN2-209ENST00000602670 GJA5P36382 358 aa16.45■□□□□ 0.22
SFXN2-209ENST00000602670 CTSWP56202 376 aa16.45■□□□□ 0.22
SFXN2-209ENST00000602670 SP3Q02447 781 aa16.45■□□□□ 0.22
SFXN2-209ENST00000602670 TTLL5Q6EMB2 1281 aa16.45■□□□□ 0.22
SFXN2-209ENST00000602670 TMEM106CQ9BVX2 250 aa16.45■□□□□ 0.22
SFXN2-209ENST00000602670 BSDC1Q9NW68 430 aaPredicted RBP16.45■□□□□ 0.22
SFXN2-209ENST00000602670 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
SFXN2-209ENST00000602670 H0YGN5 161 aa16.44■□□□□ 0.22
SFXN2-209ENST00000602670 KLRK1P26718 216 aa16.44■□□□□ 0.22
SFXN2-209ENST00000602670 OTUD5Q96G74 571 aa16.44■□□□□ 0.22
SFXN2-209ENST00000602670 PTPN18Q99952 460 aa16.44■□□□□ 0.22
SFXN2-209ENST00000602670 GREM2Q9H772 168 aa16.44■□□□□ 0.22
SFXN2-209ENST00000602670 MYH3P11055 1940 aa16.44■□□□□ 0.22
SFXN2-209ENST00000602670 UNCXA6NJT0 531 aa16.43■□□□□ 0.22
SFXN2-209ENST00000602670 PPP1R12BO60237 982 aaPredicted RBP16.43■□□□□ 0.22
SFXN2-209ENST00000602670 OTUD7BQ6GQQ9 843 aa16.43■□□□□ 0.22
SFXN2-209ENST00000602670 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
SFXN2-209ENST00000602670 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
SFXN2-209ENST00000602670 PPP2R3BQ9Y5P8 575 aa16.43■□□□□ 0.22
SFXN2-209ENST00000602670 OTOFQ9HC10 1997 aa16.42■□□□□ 0.22
SFXN2-209ENST00000602670 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
SFXN2-209ENST00000602670 GTF2IP78347 998 aa16.42■□□□□ 0.22
SFXN2-209ENST00000602670 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
SFXN2-209ENST00000602670 PCDHAC2Q9Y5I4 1007 aa16.42■□□□□ 0.22
SFXN2-209ENST00000602670 PTCH2Q9Y6C5 1203 aa16.42■□□□□ 0.22
SFXN2-209ENST00000602670 ZNF804BA4D1E1 1349 aa16.42■□□□□ 0.22
SFXN2-209ENST00000602670 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
SFXN2-209ENST00000602670 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
SFXN2-209ENST00000602670 MTMR14Q8NCE2 650 aa16.41■□□□□ 0.22
SFXN2-209ENST00000602670 METTL22Q9BUU2 404 aaPredicted RBP16.41■□□□□ 0.22
SFXN2-209ENST00000602670 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
SFXN2-209ENST00000602670 COL6A3P12111 3177 aa16.4■□□□□ 0.22
SFXN2-209ENST00000602670 NBPF12Q5TAG4 269 aaPredicted RBP16.4■□□□□ 0.22
SFXN2-209ENST00000602670 CERS5Q8N5B7 392 aa16.4■□□□□ 0.22
SFXN2-209ENST00000602670 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
SFXN2-209ENST00000602670 CLRN2A0PK11 232 aa16.39■□□□□ 0.21
SFXN2-209ENST00000602670 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms