RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 SLC9C2Q5TAH2 1124 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
ZNF558-207ENST00000601372 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 TNIP1Q15025 636 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 PRKG1Q13976 671 aa12.85□□□□□ -0.35
ZNF558-207ENST00000601372 NAP1L1P55209 391 aaKnown RBP12.84□□□□□ -0.35
ZNF558-207ENST00000601372 CCDC112Q8NEF3 446 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 CHL1O00533 1208 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 HOXB7P09629 217 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
ZNF558-207ENST00000601372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.354e-6■□□□□ 11.2
ZNF558-207ENST00000601372 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
ZNF558-207ENST00000601372 WASF1Q92558 559 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 RRAGDQ9NQL2 400 aaPredicted RBP12.84□□□□□ -0.35
ZNF558-207ENST00000601372 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
ZNF558-207ENST00000601372 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
ZNF558-207ENST00000601372 PALLDQ8WX93 1383 aa12.83□□□□□ -0.35
ZNF558-207ENST00000601372 ARGLU1Q9NWB6 273 aaPredicted RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 SAP30BPQ9UHR5 308 aaKnown RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 RRP9O43818 475 aaKnown RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 GIGYF1O75420 1035 aaPredicted RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 ISM2Q6H9L7 571 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 PIGBQ92521 554 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 STX8Q9UNK0 236 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 ZBTB7AO95365 584 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 AK2P54819 239 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 TEX35Q5T0J7 233 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 SCLT1Q96NL6 688 aa12.83□□□□□ -0.36
ZNF558-207ENST00000601372 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
ZNF558-207ENST00000601372 CHMLP26374 656 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 GPS2Q13227 327 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 TCIRG1Q13488 830 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 TMEM67Q5HYA8 995 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 CEP57L1Q8IYX8 460 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
ZNF558-207ENST00000601372 SSBP05455 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
ZNF558-207ENST00000601372 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 H7C1D1 291 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 PLCG2P16885 1265 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 ZNF521Q96K83 1311 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 IPO7O95373 1038 aaKnown RBP12.82□□□□□ -0.36
ZNF558-207ENST00000601372 CTSWP56202 376 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 UBE2HP62256 183 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 SERPINB2P05120 415 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 CBX1P83916 185 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 ZBTB1Q9Y2K1 713 aa12.82□□□□□ -0.36
ZNF558-207ENST00000601372 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 BEGAINQ9BUH8 593 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 TRMT1Q9NXH9 659 aaKnown RBP12.81□□□□□ -0.36
ZNF558-207ENST00000601372 BIN1O00499 593 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 GOLGA8AA7E2F4 631 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 GOLGA8BA8MQT2 603 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 MAP3K15Q6ZN16 1313 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 GSPT1P15170 499 aaKnown RBP12.81□□□□□ -0.36
ZNF558-207ENST00000601372 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 PICK1Q9NRD5 415 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
ZNF558-207ENST00000601372 CCDC196A0A1B0GTZ2 297 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 CRB1P82279 1406 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 CCDC70Q6NSX1 233 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 C16orf45Q96MC5 204 aaPredicted RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 PTCH1Q13635 1447 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 RICTORQ6R327 1708 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 PNMA6EA0A0J9YXQ4 647 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 ZFYP08048 801 aaPredicted RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 SRP68Q9UHB9 627 aaKnown RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 C8orf76Q96K31 380 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 SSRP1Q08945 709 aaKnown RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 HMGB1P09429 215 aaKnown RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
ZNF558-207ENST00000601372 MPHOSPH6Q99547 160 aaKnown RBP12.8□□□□□ -0.36
ZNF558-207ENST00000601372 GCKRQ14397 625 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 NEXMIFQ5QGS0 1516 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 F13A1P00488 732 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 CLCN1P35523 988 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 VPS72Q15906 364 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 TIMM10P62072 90 aa12.79□□□□□ -0.36
ZNF558-207ENST00000601372 Q6ZUG5 572 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms