RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 USP17L4A6NCW7 530 aa16.18■□□□□ 0.18
FKRP-223ENST00000600872 IFIT5Q13325 482 aaKnown RBP16.18■□□□□ 0.18
FKRP-223ENST00000600872 DEFB115Q30KQ5 88 aa16.18■□□□□ 0.18
FKRP-223ENST00000600872 RABL6Q3YEC7 729 aaPredicted RBP16.18■□□□□ 0.18
FKRP-223ENST00000600872 C15orf52Q6ZUT6 534 aaKnown RBP16.18■□□□□ 0.18
FKRP-223ENST00000600872 USP17L1Q7RTZ2 530 aa16.18■□□□□ 0.18
FKRP-223ENST00000600872 MXD3Q9BW11 206 aa16.18■□□□□ 0.18
FKRP-223ENST00000600872 ANKRD2Q9GZV1 360 aa16.18■□□□□ 0.18
FKRP-223ENST00000600872 COA1Q9GZY4 146 aa16.18■□□□□ 0.18
FKRP-223ENST00000600872 C9orf78Q9NZ63 289 aaPredicted RBP16.18■□□□□ 0.18
FKRP-223ENST00000600872 TAF5LO75529 589 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
FKRP-223ENST00000600872 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 SAPCD2Q86UD0 394 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 ANKRD44Q8N8A2 993 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 HELBQ8NG08 1087 aaPredicted RBP16.17■□□□□ 0.18
FKRP-223ENST00000600872 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
FKRP-223ENST00000600872 G3V3G9 751 aa16.16■□□□□ 0.18
FKRP-223ENST00000600872 CELF2O95319 508 aaKnown RBP16.16■□□□□ 0.18
FKRP-223ENST00000600872 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
FKRP-223ENST00000600872 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
FKRP-223ENST00000600872 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
FKRP-223ENST00000600872 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
FKRP-223ENST00000600872 STRIP1Q5VSL9 837 aa16.16■□□□□ 0.18
FKRP-223ENST00000600872 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
FKRP-223ENST00000600872 WDR33Q9C0J8 1336 aaKnown RBP16.16■□□□□ 0.18
FKRP-223ENST00000600872 CT47B1P0C2W7 299 aaPredicted RBP16.15■□□□□ 0.18
FKRP-223ENST00000600872 PUS3Q9BZE2 481 aaKnown RBP16.15■□□□□ 0.18
FKRP-223ENST00000600872 WBP1LQ9NX94 342 aa16.15■□□□□ 0.18
FKRP-223ENST00000600872 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
FKRP-223ENST00000600872 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 FOXN1O15353 648 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 USP17L8P0C7I0 530 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 LDHAL6AQ6ZMR3 332 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 MIER1Q8N108 512 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 CD209Q9NNX6 404 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 MYOZ2Q9NPC6 264 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 RIPOR2Q9Y4F9 1068 aa16.14■□□□□ 0.17
FKRP-223ENST00000600872 SCARF1Q14162 830 aa16.13■□□□□ 0.17
FKRP-223ENST00000600872 CYP4F22Q6NT55 531 aa16.13■□□□□ 0.17
FKRP-223ENST00000600872 KRT26Q7Z3Y9 468 aa16.13■□□□□ 0.17
FKRP-223ENST00000600872 HHIPL1Q96JK4 782 aa16.13■□□□□ 0.17
FKRP-223ENST00000600872 CAPNS2Q96L46 248 aa16.13■□□□□ 0.17
FKRP-223ENST00000600872 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
FKRP-223ENST00000600872 IL1R1P14778 569 aa16.12■□□□□ 0.17
FKRP-223ENST00000600872 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
FKRP-223ENST00000600872 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
FKRP-223ENST00000600872 CERS5Q8N5B7 392 aa16.12■□□□□ 0.17
FKRP-223ENST00000600872 ZBED3Q96IU2 234 aaPredicted RBP16.12■□□□□ 0.17
FKRP-223ENST00000600872 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
FKRP-223ENST00000600872 GTF2IP78347 998 aa16.11■□□□□ 0.17
FKRP-223ENST00000600872 NBPF9Q3BBW0 867 aa16.11■□□□□ 0.17
FKRP-223ENST00000600872 VGLL2Q8N8G2 317 aa16.11■□□□□ 0.17
FKRP-223ENST00000600872 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
FKRP-223ENST00000600872 NOB1Q9ULX3 412 aaKnown RBP16.11■□□□□ 0.17
FKRP-223ENST00000600872 MYO3BQ8WXR4 1341 aa16.11■□□□□ 0.17
FKRP-223ENST00000600872 WNT10BO00744 389 aa16.1■□□□□ 0.17
FKRP-223ENST00000600872 RFX5P48382 616 aaPredicted RBP16.1■□□□□ 0.17
FKRP-223ENST00000600872 LRRC24Q50LG9 513 aa16.1■□□□□ 0.17
FKRP-223ENST00000600872 ANGEL2Q5VTE6 544 aaKnown RBP16.1■□□□□ 0.17
FKRP-223ENST00000600872 ZNF408Q9H9D4 720 aa16.1■□□□□ 0.17
FKRP-223ENST00000600872 CNNM1Q9NRU3 951 aa16.1■□□□□ 0.17
FKRP-223ENST00000600872 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
FKRP-223ENST00000600872 KCNJ4P48050 445 aa16.09■□□□□ 0.17
FKRP-223ENST00000600872 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
FKRP-223ENST00000600872 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
FKRP-223ENST00000600872 ECM29Q5VYK3 1845 aa16.09■□□□□ 0.17
FKRP-223ENST00000600872 PLIN1O60240 522 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 AOC2O75106 756 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 ECE1P42892 770 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
FKRP-223ENST00000600872 KLHDC4Q8TBB5 520 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 CDCA5Q96FF9 252 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
FKRP-223ENST00000600872 ZIC5Q96T25 663 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.16
FKRP-223ENST00000600872 FAM155AB1AL88 458 aaPredicted RBP16.07■□□□□ 0.16
FKRP-223ENST00000600872 MMP14P50281 582 aa16.07■□□□□ 0.16
FKRP-223ENST00000600872 KIAA0825Q8IV33 1275 aa16.07■□□□□ 0.16
FKRP-223ENST00000600872 SULF1Q8IWU6 871 aa16.07■□□□□ 0.16
FKRP-223ENST00000600872 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
FKRP-223ENST00000600872 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
FKRP-223ENST00000600872 PCDHAC2Q9Y5I4 1007 aa16.07■□□□□ 0.16
FKRP-223ENST00000600872 FAM205AQ6ZU69 1335 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 MROH5Q6ZUA9 1318 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 HSPA8P11142 646 aaKnown RBP16.06■□□□□ 0.16
FKRP-223ENST00000600872 MAP2K2P36507 400 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 HUNKP57058 714 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
FKRP-223ENST00000600872 MAP2K1Q02750 393 aaPredicted RBP16.06■□□□□ 0.16
FKRP-223ENST00000600872 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
FKRP-223ENST00000600872 ZNF804AQ7Z570 1209 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 FBXO33Q7Z6M2 555 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 FBXW7Q969H0 707 aa16.06■□□□□ 0.16
FKRP-223ENST00000600872 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms