RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 GSTO1P78417 241 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
SCN8A-208ENST00000599343 CPLX4Q7Z7G2 160 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 CCDC42Q96M95 316 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
SCN8A-208ENST00000599343 PLIN2Q99541 437 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 EXOC5O00471 708 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 SPTLC2O15270 562 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 IFNKQ9P0W0 207 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 WASLO00401 505 aaPredicted RBP13.41□□□□□ -0.26
SCN8A-208ENST00000599343 PLS1Q14651 629 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 USP37Q86T82 979 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 LMBR1Q8WVP7 490 aa13.41□□□□□ -0.26
SCN8A-208ENST00000599343 FBLN1P23142 703 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 TTC31Q49AM3 519 aaPredicted RBP13.4□□□□□ -0.26
SCN8A-208ENST00000599343 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 EBAG9O00559 213 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 ATP2A1O14983 1001 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 LRRC45Q96CN5 670 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 TTC14Q96N46 770 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 NEK11Q8NG66 645 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 CCDC114Q96M63 670 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 CNNM2Q9H8M5 875 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 ANAPC4Q9UJX5 808 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 CFAP58Q5T655 872 aa13.4□□□□□ -0.26
SCN8A-208ENST00000599343 FAM13AO94988 1023 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 MCM7P33993 719 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 SMARCC2Q8TAQ2 1214 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 APOBRQ0VD83 1088 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 SEC62Q99442 399 aaKnown RBP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 CDK13Q14004 1512 aaKnown RBP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 GTF3C6Q969F1 213 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 PPP1R7Q15435 360 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 ATP2B3Q16720 1220 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 UBLCP1Q8WVY7 318 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 TCHPQ9BT92 498 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCN8A-208ENST00000599343 AMOTL2Q9Y2J4 779 aa13.39□□□□□ -0.27
SCN8A-208ENST00000599343 PRXQ9BXM0 1461 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 C10orf67Q8IYJ2 551 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
SCN8A-208ENST00000599343 RXRAP19793 462 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 IMPG2Q9BZV3 1241 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 ZFYP08048 801 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-208ENST00000599343 KRT2P35908 639 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 CEP83Q9Y592 693 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 RFC4P35249 363 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 NBPF6Q5VWK0 638 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-208ENST00000599343 XAGE3Q8WTP9 111 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 NBPF4Q96M43 638 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-208ENST00000599343 FAM160A1Q05DH4 1040 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
SCN8A-208ENST00000599343 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-208ENST00000599343 ZBTB21Q9ULJ3 1066 aa13.38□□□□□ -0.27
SCN8A-208ENST00000599343 EPRSP07814 1512 aaKnown RBP13.37□□□□□ -0.27
SCN8A-208ENST00000599343 FAM135AQ9P2D6 1515 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 AK2P54819 239 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
SCN8A-208ENST00000599343 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 ANKRD24Q8TF21 1146 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 TNNI2P48788 182 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 SAMD15Q9P1V8 674 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 POGZQ7Z3K3 1410 aa13.37□□□□□ -0.27
SCN8A-208ENST00000599343 ZGPATQ8N5A5 531 aaKnown RBP13.37□□□□□ -0.27
SCN8A-208ENST00000599343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCN8A-208ENST00000599343 ZWINTO95229 277 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 RAPGEF1Q13905 1077 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 FAM76AQ8TAV0 307 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 C6orf50Q9HD87 102 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 PAG1Q9NWQ8 432 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 BICDL2A1A5D9 508 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 ST5P78524 1137 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 MAGEB6P1A0A0J9YX57 407 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 NOL3O60936 208 aaKnown RBP13.36□□□□□ -0.27
SCN8A-208ENST00000599343 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
SCN8A-208ENST00000599343 VAV2P52735 878 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 LMBR1LQ6UX01 489 aa13.36□□□□□ -0.27
SCN8A-208ENST00000599343 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms