RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 GLIS2Q9BZE0 524 aaPredicted RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 PUS3Q9BZE2 481 aaKnown RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 ANKRD2Q9GZV1 360 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 MKRN1Q9UHC7 482 aaKnown RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 NOB1Q9ULX3 412 aaKnown RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 CHMP3Q9Y3E7 222 aa15.36■□□□□ 0.05
LIG1-217ENST00000599165 ASTN2O75129 1339 aaPredicted RBP15.36■□□□□ 0.05
LIG1-217ENST00000599165 ZNF280AP59817 542 aaPredicted RBP15.35■□□□□ 0.05
LIG1-217ENST00000599165 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
LIG1-217ENST00000599165 C15orf52Q6ZUT6 534 aaKnown RBP15.35■□□□□ 0.05
LIG1-217ENST00000599165 ZC3H15Q8WU90 426 aaKnown RBP15.35■□□□□ 0.05
LIG1-217ENST00000599165 H7C1D1 291 aa15.34■□□□□ 0.05
LIG1-217ENST00000599165 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
LIG1-217ENST00000599165 COA1Q9GZY4 146 aa15.34■□□□□ 0.05
LIG1-217ENST00000599165 TNNQ9UQP3 1299 aa15.34■□□□□ 0.05
LIG1-217ENST00000599165 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
LIG1-217ENST00000599165 USP17L3A6NCW0 530 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 USP17L4A6NCW7 530 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 RASSF10A6NK89 507 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 LDHAL6AQ6ZMR3 332 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 USP17L1Q7RTZ2 530 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 AGBL3Q8NEM8 1001 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 RIPOR2Q9Y4F9 1068 aa15.33■□□□□ 0.04
LIG1-217ENST00000599165 G3V3G9 751 aa15.32■□□□□ 0.04
LIG1-217ENST00000599165 RFX5P48382 616 aaPredicted RBP15.32■□□□□ 0.04
LIG1-217ENST00000599165 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
LIG1-217ENST00000599165 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
LIG1-217ENST00000599165 RBM26Q5T8P6 1007 aaKnown RBP15.32■□□□□ 0.04
LIG1-217ENST00000599165 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
LIG1-217ENST00000599165 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
LIG1-217ENST00000599165 BCAR3O75815 825 aa15.31■□□□□ 0.04
LIG1-217ENST00000599165 VEGFBP49765 207 aa15.31■□□□□ 0.04
LIG1-217ENST00000599165 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
LIG1-217ENST00000599165 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
LIG1-217ENST00000599165 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
LIG1-217ENST00000599165 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
LIG1-217ENST00000599165 ADM5C9JUS6 153 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 USP17L8P0C7I0 530 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 USP48Q86UV5 1035 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 CERS5Q8N5B7 392 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 ARAP2Q8WZ64 1704 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 API5Q9BZZ5 524 aaKnown RBP15.3■□□□□ 0.04
LIG1-217ENST00000599165 CNNM1Q9NRU3 951 aa15.3■□□□□ 0.04
LIG1-217ENST00000599165 IL1R1P14778 569 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 KCNJ4P48050 445 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 GTF2IP78347 998 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 TAF7LQ5H9L4 462 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 MYOZ2Q9NPC6 264 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 GGA3Q9NZ52 723 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 TLL2Q9Y6L7 1015 aa15.29■□□□□ 0.04
LIG1-217ENST00000599165 PLIN1O60240 522 aa15.28■□□□□ 0.04
LIG1-217ENST00000599165 CELF2O95319 508 aaKnown RBP15.28■□□□□ 0.04
LIG1-217ENST00000599165 TRIM27P14373 513 aa15.28■□□□□ 0.04
LIG1-217ENST00000599165 INTS3Q68E01 1043 aaKnown RBP15.28■□□□□ 0.04
LIG1-217ENST00000599165 TTLL5Q6EMB2 1281 aa15.28■□□□□ 0.04
LIG1-217ENST00000599165 MEIS3Q99687 375 aa15.28■□□□□ 0.04
LIG1-217ENST00000599165 ECM29Q5VYK3 1845 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 KIF16BQ96L93 1317 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 HSPA1AP0DMV8 641 aaKnown RBP15.27■□□□□ 0.04
LIG1-217ENST00000599165 HSPA1BP0DMV9 641 aaKnown RBP15.27■□□□□ 0.04
LIG1-217ENST00000599165 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
LIG1-217ENST00000599165 UBE4AQ14139 1066 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 SCARF1Q14162 830 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 SAPCD2Q86UD0 394 aa15.27■□□□□ 0.04
LIG1-217ENST00000599165 ZBED3Q96IU2 234 aaPredicted RBP15.27■□□□□ 0.04
LIG1-217ENST00000599165 FAM84BQ96KN1 310 aaPredicted RBP15.27■□□□□ 0.04
LIG1-217ENST00000599165 ABT1Q9ULW3 272 aaKnown RBP15.27■□□□□ 0.04
LIG1-217ENST00000599165 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 MROH5Q6ZUA9 1318 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 GYG1P46976 350 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 NBPF9Q3BBW0 867 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 ANGEL2Q5VTE6 544 aaKnown RBP15.26■□□□□ 0.03
LIG1-217ENST00000599165 ATG9AQ7Z3C6 839 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 TDRD7Q8NHU6 1098 aaKnown RBP15.26■□□□□ 0.03
LIG1-217ENST00000599165 FBXW7Q969H0 707 aa15.26■□□□□ 0.03
LIG1-217ENST00000599165 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
LIG1-217ENST00000599165 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
LIG1-217ENST00000599165 AOX1Q06278 1338 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 WNT10BO00744 389 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 UBTFL1P0CB47 393 aaPredicted RBP15.25■□□□□ 0.03
LIG1-217ENST00000599165 FGFR2P21802 821 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 CYP4F22Q6NT55 531 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 ZNF408Q9H9D4 720 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 JAG2Q9Y219 1238 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 PCDHAC2Q9Y5I4 1007 aa15.25■□□□□ 0.03
LIG1-217ENST00000599165 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
LIG1-217ENST00000599165 EYA2O00167 538 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 SASH1O94885 1247 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 PDE8BO95263 885 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 ZNF804AQ7Z570 1209 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 FBXO33Q7Z6M2 555 aa15.24■□□□□ 0.03
LIG1-217ENST00000599165 DCPSQ96C86 337 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms