RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 ST3GAL1Q11201 340 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 UVSSAQ2YD98 709 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 C11orf57Q6ZUT1 292 aaPredicted RBP14.47□□□□□ -0.09
USHBP1-207ENST00000597928 KBTBD3Q8NAB2 608 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 PGBD1Q96JS3 809 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 GTF3C6Q969F1 213 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 SLC26A6Q9BXS9 759 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 ZSWIM4Q9H7M6 989 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 KCNQ4P56696 695 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 AKAP17AQ02040 695 aaKnown RBP14.47□□□□□ -0.09
USHBP1-207ENST00000597928 XAGE2Q96GT9 111 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 DCAF5Q96JK2 942 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 C19orf44Q9H6X5 657 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 HMG20BQ9P0W2 317 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 LRP2BPQ9P2M1 347 aa14.47□□□□□ -0.09
USHBP1-207ENST00000597928 HSPD1P10809 573 aaKnown RBP14.46□□□□□ -0.09
USHBP1-207ENST00000597928 STOX1Q6ZVD7 989 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 ERBB3P21860 1342 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 DYNC1I1O14576 645 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 RAD21O60216 631 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 HOXB7P09629 217 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 ATP2B3Q16720 1220 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 HS1BP3Q53T59 392 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 DENND2AQ9ULE3 1009 aa14.46□□□□□ -0.09
USHBP1-207ENST00000597928 RNF113AO15541 343 aaKnown RBP14.45□□□□□ -0.1
USHBP1-207ENST00000597928 ATP5JP18859 108 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 PTPN14Q15678 1187 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 EYA2O00167 538 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 IFIT3O14879 490 aaKnown RBP14.45□□□□□ -0.1
USHBP1-207ENST00000597928 SLC3A2P08195 630 aaKnown RBP14.45□□□□□ -0.1
USHBP1-207ENST00000597928 IFNKQ9P0W0 207 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 M0R2C6 588 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 MCM5P33992 734 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 OSBP2Q969R2 916 aa14.45□□□□□ -0.1
USHBP1-207ENST00000597928 ERICH4A6NGS2 130 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 SKIDA1Q1XH10 827 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 ALG1Q9BT22 464 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 NAT10Q9H0A0 1025 aaKnown RBP14.44□□□□□ -0.1
USHBP1-207ENST00000597928 BCL2L12Q9HB09 334 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 RAI14Q9P0K7 980 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 CLIC4Q9Y696 253 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 CCDC69A6NI79 296 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 COBLO75128 1261 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 IL15P40933 162 aaPredicted RBP14.44□□□□□ -0.1
USHBP1-207ENST00000597928 CTDSPL2Q05D32 466 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 TRERF1Q96PN7 1200 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 NAPBQ9H115 298 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 KIF20BQ96Q89 1820 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 PRDM1O75626 825 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 SCARF1Q14162 830 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 PDIA6Q15084 440 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 TM6SF1Q9BZW5 370 aa14.44□□□□□ -0.1
USHBP1-207ENST00000597928 METAP2P50579 478 aaKnown RBP eCLIP14.43□□□□□ -0.1
USHBP1-207ENST00000597928 LRRFIP1Q32MZ4 808 aaKnown RBP14.43□□□□□ -0.1
USHBP1-207ENST00000597928 TMEM67Q5HYA8 995 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 CLSTN2Q9H4D0 955 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 BABAM1Q9NWV8 329 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 USP32Q8NFA0 1604 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 FGAP02671 866 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 ZNF75DP51815 510 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 NRKQ7Z2Y5 1582 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 CACTINQ8WUQ7 758 aaKnown RBP14.43□□□□□ -0.1
USHBP1-207ENST00000597928 ANO10Q9NW15 660 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 SSH2Q76I76 1423 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 ERICH2A1L162 156 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 GPAA1O43292 621 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 STX1AQ16623 288 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 CLIC6Q96NY7 704 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.43□□□□□ -0.1
USHBP1-207ENST00000597928 PUS7LQ9H0K6 701 aaKnown RBP14.43□□□□□ -0.1
USHBP1-207ENST00000597928 CTNNA3Q9UI47 895 aa14.43□□□□□ -0.1
USHBP1-207ENST00000597928 NBPF26B4DH59 902 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 DHX16O60231 1041 aaKnown RBP14.42□□□□□ -0.1
USHBP1-207ENST00000597928 NBPF14Q5TI25 921 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 NBPF10Q6P3W6 841 aaKnown RBP14.42□□□□□ -0.1
USHBP1-207ENST00000597928 NBPF15Q8N660 670 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 STAMQ92783 540 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 A0A0U1RQG5 324 aaPredicted RBP14.42□□□□□ -0.1
USHBP1-207ENST00000597928 SAFBQ15424 915 aaKnown RBP eCLIP14.42□□□□□ -0.1
USHBP1-207ENST00000597928 CEP135Q66GS9 1140 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 GPIHBP1Q8IV16 184 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
USHBP1-207ENST00000597928 KCNJ14Q9UNX9 436 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 KNDC1Q76NI1 1749 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 STX17P56962 302 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 NCOA7Q8NI08 942 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 KCNF1Q9H3M0 494 aa14.42□□□□□ -0.1
USHBP1-207ENST00000597928 SPTLC2O15270 562 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 RANBP6O60518 1105 aaKnown RBP14.41□□□□□ -0.1
USHBP1-207ENST00000597928 ITGA6P23229 1130 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 AFMP43652 599 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 NDUFA8P51970 172 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 ZNF827Q17R98 1081 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 NSUN7Q8NE18 718 aaKnown RBP14.41□□□□□ -0.1
USHBP1-207ENST00000597928 HAUS7Q99871 368 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 MAST3O60307 1309 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms