RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, humanhuman

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-208ENST00000596899 RPS8P62241 208 aaKnown RBP17.14■□□□□ 0.33
ZNF43-208ENST00000596899 USP17L1Q7RTZ2 530 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 DPF3Q92784 378 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 SLC10A4Q96EP9 437 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 PCGF6Q9BYE7 350 aa17.14■□□□□ 0.33
ZNF43-208ENST00000596899 SASH1O94885 1247 aa17.13■□□□□ 0.33
ZNF43-208ENST00000596899 FAM89AQ96GI7 184 aa17.13■□□□□ 0.33
ZNF43-208ENST00000596899 OTUD7BQ6GQQ9 843 aa17.12■□□□□ 0.33
ZNF43-208ENST00000596899 APOBEC3FQ8IUX4 373 aaKnown RBP17.12■□□□□ 0.33
ZNF43-208ENST00000596899 OGFOD1Q8N543 542 aa17.12■□□□□ 0.33
ZNF43-208ENST00000596899 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
ZNF43-208ENST00000596899 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
ZNF43-208ENST00000596899 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
ZNF43-208ENST00000596899 ZSWIM8A7E2V4 1837 aa17.11■□□□□ 0.33
ZNF43-208ENST00000596899 ECM29Q5VYK3 1845 aa17.1■□□□□ 0.33
ZNF43-208ENST00000596899 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
ZNF43-208ENST00000596899 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
ZNF43-208ENST00000596899 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
ZNF43-208ENST00000596899 WTIPA6NIX2 430 aaPredicted RBP17.09■□□□□ 0.33
ZNF43-208ENST00000596899 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
ZNF43-208ENST00000596899 FBXW7Q969H0 707 aa17.09■□□□□ 0.33
ZNF43-208ENST00000596899 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
ZNF43-208ENST00000596899 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
ZNF43-208ENST00000596899 SSC5DA1L4H1 1573 aa17.09■□□□□ 0.33
ZNF43-208ENST00000596899 OTOFQ9HC10 1997 aa17.09■□□□□ 0.33
ZNF43-208ENST00000596899 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
ZNF43-208ENST00000596899 NEFMP07197 916 aa17.08■□□□□ 0.32
ZNF43-208ENST00000596899 ARHGEF6Q15052 776 aa17.08■□□□□ 0.32
ZNF43-208ENST00000596899 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
ZNF43-208ENST00000596899 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
ZNF43-208ENST00000596899 MYO3BQ8WXR4 1341 aa17.07■□□□□ 0.32
ZNF43-208ENST00000596899 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
ZNF43-208ENST00000596899 IRS4O14654 1257 aaPredicted RBP17.07■□□□□ 0.32
ZNF43-208ENST00000596899 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
ZNF43-208ENST00000596899 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
ZNF43-208ENST00000596899 PTPN18Q99952 460 aa17.07■□□□□ 0.32
ZNF43-208ENST00000596899 XDHP47989 1333 aa17.06■□□□□ 0.32
ZNF43-208ENST00000596899 LAMA3Q16787 3333 aa17.06■□□□□ 0.32
ZNF43-208ENST00000596899 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
ZNF43-208ENST00000596899 GJA5P36382 358 aa17.06■□□□□ 0.32
ZNF43-208ENST00000596899 SHISA4Q96DD7 197 aa17.06■□□□□ 0.32
ZNF43-208ENST00000596899 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
ZNF43-208ENST00000596899 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
ZNF43-208ENST00000596899 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
ZNF43-208ENST00000596899 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
ZNF43-208ENST00000596899 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
ZNF43-208ENST00000596899 HTATIP2Q9BUP3 242 aa17.04■□□□□ 0.32
ZNF43-208ENST00000596899 MED23Q9ULK4 1368 aa17.03■□□□□ 0.32
ZNF43-208ENST00000596899 UNCXA6NJT0 531 aa17.03■□□□□ 0.32
ZNF43-208ENST00000596899 NFE2L2Q16236 605 aa17.03■□□□□ 0.32
ZNF43-208ENST00000596899 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
ZNF43-208ENST00000596899 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
ZNF43-208ENST00000596899 UNC80Q8N2C7 3258 aa17.02■□□□□ 0.32
ZNF43-208ENST00000596899 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
ZNF43-208ENST00000596899 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.32
ZNF43-208ENST00000596899 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.32
ZNF43-208ENST00000596899 COL25A1Q9BXS0 654 aaPredicted RBP17.02■□□□□ 0.32
ZNF43-208ENST00000596899 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
ZNF43-208ENST00000596899 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
ZNF43-208ENST00000596899 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
ZNF43-208ENST00000596899 MMP14P50281 582 aa17.01■□□□□ 0.31
ZNF43-208ENST00000596899 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
ZNF43-208ENST00000596899 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
ZNF43-208ENST00000596899 ZBTB7BO15156 539 aaPredicted RBP17■□□□□ 0.31
ZNF43-208ENST00000596899 MTFR1Q15390 333 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 ANKRD18AQ8IVF6 992 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
ZNF43-208ENST00000596899 ARHGAP39Q9C0H5 1083 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
ZNF43-208ENST00000596899 SUPT20HL1Q3ZLR7 823 aa16.99■□□□□ 0.31
ZNF43-208ENST00000596899 NKX2-3Q8TAU0 364 aa16.99■□□□□ 0.31
ZNF43-208ENST00000596899 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
ZNF43-208ENST00000596899 ELP3Q9H9T3 547 aa16.99■□□□□ 0.31
ZNF43-208ENST00000596899 KIF22Q14807 665 aa16.98■□□□□ 0.31
ZNF43-208ENST00000596899 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
ZNF43-208ENST00000596899 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
ZNF43-208ENST00000596899 BRI3BPQ8WY22 251 aa16.98■□□□□ 0.31
ZNF43-208ENST00000596899 MS4A4AQ96JQ5 239 aa16.98■□□□□ 0.31
ZNF43-208ENST00000596899 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
ZNF43-208ENST00000596899 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
ZNF43-208ENST00000596899 USP2O75604 605 aaPredicted RBP16.97■□□□□ 0.31
ZNF43-208ENST00000596899 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
ZNF43-208ENST00000596899 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
ZNF43-208ENST00000596899 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
ZNF43-208ENST00000596899 TTLL5Q6EMB2 1281 aa16.97■□□□□ 0.31
ZNF43-208ENST00000596899 STXBP5LQ9Y2K9 1186 aa16.97■□□□□ 0.31
ZNF43-208ENST00000596899 ZNF804BA4D1E1 1349 aa16.96■□□□□ 0.31
ZNF43-208ENST00000596899 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.31
ZNF43-208ENST00000596899 CCL15-CCL14A0A0B4J2E2 113 aa16.96■□□□□ 0.31
ZNF43-208ENST00000596899 GJA8P48165 433 aa16.96■□□□□ 0.31
ZNF43-208ENST00000596899 LACTBP83111 547 aaPredicted RBP16.96■□□□□ 0.31
ZNF43-208ENST00000596899 TRIM28Q13263 835 aaKnown RBP16.96■□□□□ 0.31
ZNF43-208ENST00000596899 CCL15Q16663 113 aa16.96■□□□□ 0.31
ZNF43-208ENST00000596899 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
ZNF43-208ENST00000596899 DEFB123Q8N688 67 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms