RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
SHKBP1-209ENST00000595803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-209ENST00000595803 NRXN2Q9P2S2 1712 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 RASSF10A6NK89 507 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 ERC2O15083 957 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 PDE6BP35913 854 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 TIMM10P62072 90 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 LDHDQ86WU2 507 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 CELF1Q92879 486 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 ECHDC1Q9NTX5 307 aa15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-209ENST00000595803 AOX1Q06278 1338 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 SALL3Q9BXA9 1300 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 PDE8BO95263 885 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 GRAPQ13588 217 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 BMP2KLQ5H9B9 411 aa15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 GRAPLQ8TC17 118 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-209ENST00000595803 WDR33Q9C0J8 1336 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-209ENST00000595803 A0A1B0GUL7 405 aa15.95■□□□□ 0.14
SHKBP1-209ENST00000595803 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-209ENST00000595803 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
SHKBP1-209ENST00000595803 BBOX1O75936 387 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 GLRX3O76003 335 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 ITGBL1O95965 494 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 CHRNDQ07001 517 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 ATP2B3Q16720 1220 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 DEFB115Q30KQ5 88 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 CRY2Q49AN0 593 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 TSHZ3Q63HK5 1081 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 DBNDD2Q9BQY9 259 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 FER1L6Q2WGJ9 1857 aa15.94■□□□□ 0.14
SHKBP1-209ENST00000595803 IQCA1LA6NCM1 817 aa15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 TRIM6-TRIM34B2RNG4 842 aa15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 HOXA10P31260 410 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 ANKRD2Q9GZV1 360 aa15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 TLR7Q9NYK1 1049 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 DBNLQ9UJU6 430 aaKnown RBP15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 MINPP1Q9UNW1 487 aa15.93■□□□□ 0.14
SHKBP1-209ENST00000595803 ADAMTSL1Q8N6G6 1762 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 SCN4AP35499 1836 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 LTBP1Q14766 1721 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 H0YIN7 160 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 TAF5LO75529 589 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 SLC5A1P13866 664 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 NPR1P16066 1061 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 ALDH1B1P30837 517 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 CCDC158Q5M9N0 1113 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 VGLL2Q8N8G2 317 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 LPIN2Q92539 896 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 RILPL2Q969X0 211 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 XAGE2Q96GT9 111 aa15.92■□□□□ 0.14
SHKBP1-209ENST00000595803 IFIT1P09914 478 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 SRGNP10124 158 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 ATP5JP18859 108 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 SDSP20132 328 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 PI4K2BQ8TCG2 481 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 MASTLQ96GX5 879 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 BACH2Q9BYV9 841 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 MCOLN1Q9GZU1 580 aa15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 TAF1DQ9H5J8 278 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-209ENST00000595803 FGFR2P21802 821 aa15.9■□□□□ 0.14
SHKBP1-209ENST00000595803 TTC39AQ5SRH9 613 aa15.9■□□□□ 0.14
SHKBP1-209ENST00000595803 ZNF622Q969S3 477 aaKnown RBP eCLIP15.9■□□□□ 0.142e-8■□□□□ 10.5
SHKBP1-209ENST00000595803 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-209ENST00000595803 BEGAINQ9BUH8 593 aa15.9■□□□□ 0.14
SHKBP1-209ENST00000595803 BOLA2Q9H3K6 86 aa15.9■□□□□ 0.14
SHKBP1-209ENST00000595803 ABT1Q9ULW3 272 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-209ENST00000595803 ZNF609O15014 1411 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 ADORA1P30542 326 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 KCNJ4P48050 445 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 UBE4AQ14139 1066 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 TMC4Q7Z404 712 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 CNTROBQ8N137 903 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 TMX4Q9H1E5 349 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 TSKSQ9UJT2 592 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 LTBP3Q9NS15 1303 aa15.89■□□□□ 0.13
SHKBP1-209ENST00000595803 TAF1P21675 1872 aa15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 COL11A2P13942 1736 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 C21orf2O43822 256 aa15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 CDC45O75419 566 aa15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 MAP4K4O95819 1239 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 STYK1Q6J9G0 422 aa15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
SHKBP1-209ENST00000595803 UQCRFS1P1P0C7P4 283 aa15.87■□□□□ 0.13
SHKBP1-209ENST00000595803 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
SHKBP1-209ENST00000595803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHKBP1-209ENST00000595803 EVI5LQ96CN4 794 aa15.87■□□□□ 0.13
SHKBP1-209ENST00000595803 TAOK3Q9H2K8 898 aa15.87■□□□□ 0.13
SHKBP1-209ENST00000595803 ANKIB1Q9P2G1 1089 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms