RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 RSBN1LQ6PCB5 846 aaPredicted RBP19.83■□□□□ 0.77
ZNF550-207ENST00000595560 C15orf52Q6ZUT6 534 aaKnown RBP19.83■□□□□ 0.77
ZNF550-207ENST00000595560 USP17L1Q7RTZ2 530 aa19.83■□□□□ 0.77
ZNF550-207ENST00000595560 AGBL3Q8NEM8 1001 aa19.83■□□□□ 0.77
ZNF550-207ENST00000595560 HELBQ8NG08 1087 aaPredicted RBP19.83■□□□□ 0.77
ZNF550-207ENST00000595560 ZC3H15Q8WU90 426 aaKnown RBP19.83■□□□□ 0.77
ZNF550-207ENST00000595560 KLRG1Q96E93 195 aa19.83■□□□□ 0.77
ZNF550-207ENST00000595560 HIRAP54198 1017 aaPredicted RBP19.82■□□□□ 0.76
ZNF550-207ENST00000595560 PGAP2Q9UHJ9 254 aa19.82■□□□□ 0.76
ZNF550-207ENST00000595560 BCAR3O75815 825 aa19.81■□□□□ 0.76
ZNF550-207ENST00000595560 UBTFL1P0CB47 393 aaPredicted RBP19.81■□□□□ 0.76
ZNF550-207ENST00000595560 INTS3Q68E01 1043 aaKnown RBP19.81■□□□□ 0.76
ZNF550-207ENST00000595560 GMLQ99445 158 aa19.81■□□□□ 0.76
ZNF550-207ENST00000595560 SNAP23O00161 211 aa19.8■□□□□ 0.76
ZNF550-207ENST00000595560 TRIM27P14373 513 aa19.8■□□□□ 0.76
ZNF550-207ENST00000595560 STRIP1Q5VSL9 837 aa19.8■□□□□ 0.76
ZNF550-207ENST00000595560 ATF7IPQ6VMQ6 1270 aa19.8■□□□□ 0.76
ZNF550-207ENST00000595560 SAMD7Q7Z3H4 446 aa19.8■□□□□ 0.76
ZNF550-207ENST00000595560 PUS3Q9BZE2 481 aaKnown RBP19.8■□□□□ 0.76
ZNF550-207ENST00000595560 RIPOR2Q9Y4F9 1068 aa19.8■□□□□ 0.76
ZNF550-207ENST00000595560 MROH5Q6ZUA9 1318 aa19.79■□□□□ 0.76
ZNF550-207ENST00000595560 TMEM88BA6NKF7 163 aa19.79■□□□□ 0.76
ZNF550-207ENST00000595560 ZNF280AP59817 542 aaPredicted RBP19.79■□□□□ 0.76
ZNF550-207ENST00000595560 DACT2Q5SW24 774 aa19.79■□□□□ 0.76
ZNF550-207ENST00000595560 HDAC5Q9UQL6 1122 aa19.79■□□□□ 0.76
ZNF550-207ENST00000595560 POLR2AP24928 1970 aaKnown RBP19.79■□□□□ 0.76
ZNF550-207ENST00000595560 MYO3BQ8WXR4 1341 aa19.78■□□□□ 0.76
ZNF550-207ENST00000595560 PLIN1O60240 522 aa19.78■□□□□ 0.76
ZNF550-207ENST00000595560 EGFRP00533 1210 aa19.78■□□□□ 0.76
ZNF550-207ENST00000595560 TBC1D10BQ4KMP7 808 aaPredicted RBP19.78■□□□□ 0.76
ZNF550-207ENST00000595560 ZNF804AQ7Z570 1209 aa19.78■□□□□ 0.76
ZNF550-207ENST00000595560 FRAT1Q92837 279 aaPredicted RBP19.78■□□□□ 0.76
ZNF550-207ENST00000595560 CD209Q9NNX6 404 aa19.78■□□□□ 0.76
ZNF550-207ENST00000595560 UBE4AQ14139 1066 aa19.77■□□□□ 0.76
ZNF550-207ENST00000595560 KIF4BQ2VIQ3 1234 aa19.77■□□□□ 0.76
ZNF550-207ENST00000595560 JMYQ8N9B5 988 aa19.77■□□□□ 0.76
ZNF550-207ENST00000595560 MEIS3Q99687 375 aa19.77■□□□□ 0.76
ZNF550-207ENST00000595560 USP17L8P0C7I0 530 aa19.76■□□□□ 0.75
ZNF550-207ENST00000595560 RFX5P48382 616 aaPredicted RBP19.76■□□□□ 0.75
ZNF550-207ENST00000595560 LRRC24Q50LG9 513 aa19.76■□□□□ 0.75
ZNF550-207ENST00000595560 TTLL5Q6EMB2 1281 aa19.76■□□□□ 0.75
ZNF550-207ENST00000595560 LRRFIP2Q9Y608 721 aaKnown RBP19.76■□□□□ 0.75
ZNF550-207ENST00000595560 PCNTO95613 3336 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 TRAF5O00463 557 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 GNAI3P08754 354 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 IL1R1P14778 569 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 ZKSCAN2Q63HK3 967 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 VGLL2Q8N8G2 317 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 KLHDC4Q8TBB5 520 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
ZNF550-207ENST00000595560 GLIS2Q9BZE0 524 aaPredicted RBP19.75■□□□□ 0.75
ZNF550-207ENST00000595560 ARAP2Q8WZ64 1704 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 CNTNAP1P78357 1384 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 GTF2IP78347 998 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 PTPN12Q05209 780 aaKnown RBP19.74■□□□□ 0.75
ZNF550-207ENST00000595560 FMR1Q06787 632 aaKnown RBP eCLIP19.74■□□□□ 0.75
ZNF550-207ENST00000595560 METTL24Q5JXM2 366 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 RBM26Q5T8P6 1007 aaKnown RBP19.74■□□□□ 0.75
ZNF550-207ENST00000595560 CDC37L1Q7L3B6 337 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 MXD3Q9BW11 206 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 MYOZ2Q9NPC6 264 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 TNNQ9UQP3 1299 aa19.74■□□□□ 0.75
ZNF550-207ENST00000595560 PDE8BO95263 885 aa19.73■□□□□ 0.75
ZNF550-207ENST00000595560 MMP14P50281 582 aa19.73■□□□□ 0.75
ZNF550-207ENST00000595560 CLUAP1Q96AJ1 413 aa19.73■□□□□ 0.75
ZNF550-207ENST00000595560 FBXO3Q9UK99 471 aa19.73■□□□□ 0.75
ZNF550-207ENST00000595560 EYA2O00167 538 aa19.72■□□□□ 0.75
ZNF550-207ENST00000595560 OGFOD1Q8N543 542 aa19.72■□□□□ 0.75
ZNF550-207ENST00000595560 DCPSQ96C86 337 aaKnown RBP19.72■□□□□ 0.75
ZNF550-207ENST00000595560 MKRN1Q9UHC7 482 aaKnown RBP19.72■□□□□ 0.75
ZNF550-207ENST00000595560 RASSF10A6NK89 507 aa19.71■□□□□ 0.75
ZNF550-207ENST00000595560 CST9Q5W186 159 aa19.71■□□□□ 0.75
ZNF550-207ENST00000595560 KRT26Q7Z3Y9 468 aa19.71■□□□□ 0.75
ZNF550-207ENST00000595560 GGA3Q9NZ52 723 aa19.71■□□□□ 0.75
ZNF550-207ENST00000595560 CIAO1O76071 339 aa19.7■□□□□ 0.74
ZNF550-207ENST00000595560 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
ZNF550-207ENST00000595560 GYG1P46976 350 aa19.7■□□□□ 0.74
ZNF550-207ENST00000595560 FKBP1AP62942 108 aaKnown RBP19.7■□□□□ 0.74
ZNF550-207ENST00000595560 MTX1Q13505 466 aa19.7■□□□□ 0.74
ZNF550-207ENST00000595560 ATG9AQ7Z3C6 839 aa19.7■□□□□ 0.74
ZNF550-207ENST00000595560 TDRD7Q8NHU6 1098 aaKnown RBP19.7■□□□□ 0.74
ZNF550-207ENST00000595560 FAM84BQ96KN1 310 aaPredicted RBP19.7■□□□□ 0.74
ZNF550-207ENST00000595560 ABT1Q9ULW3 272 aaKnown RBP19.7■□□□□ 0.74
ZNF550-207ENST00000595560 MYH13Q9UKX3 1938 aa19.7■□□□□ 0.74
ZNF550-207ENST00000595560 ECM29Q5VYK3 1845 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 SASH1O94885 1247 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 CELF2O95319 508 aaKnown RBP19.69■□□□□ 0.74
ZNF550-207ENST00000595560 SCARF1Q14162 830 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 PUM3Q15397 648 aaKnown RBP19.69■□□□□ 0.74
ZNF550-207ENST00000595560 USP48Q86UV5 1035 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 CERS5Q8N5B7 392 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 TMEM57Q8N5G2 664 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 ASTN2O75129 1339 aaPredicted RBP19.69■□□□□ 0.74
ZNF550-207ENST00000595560 FAM205AQ6ZU69 1335 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 PITPNM2Q9BZ72 1349 aa19.69■□□□□ 0.74
ZNF550-207ENST00000595560 FGFR2P21802 821 aa19.68■□□□□ 0.74
ZNF550-207ENST00000595560 ANGEL2Q5VTE6 544 aaKnown RBP19.68■□□□□ 0.74
ZNF550-207ENST00000595560 FBXO33Q7Z6M2 555 aa19.68■□□□□ 0.74
ZNF550-207ENST00000595560 SULF1Q8IWU6 871 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms